RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPKIG00000003321	Gene ID	111855043	Accession	-
Symbol		Alias	-	Full Name	40S ribosomal protein S10
Status	Confidence	Length	7016 bases	Strand	Plus strand
Position	PGUA01000286.1 : 292797 - 299812	RNA binding domain	S10_plectin
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPKIP00000017390	S10_plectin	PF03501	3.3e-46	1
ENSPKIP00000017383	S10_plectin	PF03501	4.3e-46	1
ENSPKIP00000017401	S10_plectin	PF03501	4.3e-46	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
rps10-201	ENSPKIT00000041893	957	184aa	ENSPKIP00000017383
rps10-202	ENSPKIT00000041901	1329	166aa	ENSPKIP00000017390
rps10-203	ENSPKIT00000041911	1383	184aa	ENSPKIP00000017401

Gene Model

Click here to download ENSPKIG00000003321's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPKIG00000003321's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000014411	27.8689	26.6393	paramormyrops_kingsleyae	ENSPKIP00000017401	36.9565	35.3261
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000033286	55.4945	45.6044	paramormyrops_kingsleyae	ENSPKIP00000017401	54.8913	45.1087

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.8043	75.5435	petromyzon_marinus	ENSPMAP00000010174	87.8788	84.2424
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	71.1957	64.6739	eptatretus_burgeri	ENSEBUP00000026027	82.3899	74.8428
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.6087	82.0652	lepisosteus_oculatus	ENSLOCP00000012179	77.551	77.0408
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.6087	80.9783	clupea_harengus	ENSCHAP00000011797	83.0601	81.4208
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.9783	80.4348	danio_rerio	ENSDARP00000045900	89.759	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	83.6957	83.1522	carassius_auratus	ENSCARP00000035089	88.5057	87.931
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.9783	astyanax_mexicanus	ENSAMXP00000049898	90.3614	89.759
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.9783	ictalurus_punctatus	ENSIPUP00000037154	90.3614	89.759
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.7174	76.087	esox_lucius	ENSELUP00000040179	83.1395	81.3953
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	84.2391	82.0652	electrophorus_electricus	ENSEEEP00000014416	83.3333	81.1828
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.1739	75.5435	oncorhynchus_kisutch	ENSOKIP00005000130	73.9583	72.3958
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.2609	76.6304	oncorhynchus_kisutch	ENSOKIP00005108117	82.2857	80.5714
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.1739	75.5435	oncorhynchus_kisutch	ENSOKIP00005007703	73.9583	72.3958
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.8043	77.1739	oncorhynchus_mykiss	ENSOMYP00000073785	54.3071	53.1835
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.1739	75.5435	oncorhynchus_mykiss	ENSOMYP00000013821	83.0409	81.2866
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.8043	77.1739	oncorhynchus_mykiss	ENSOMYP00000065936	60.4167	59.1667
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	79.8913	77.1739	salmo_salar	ENSSSAP00000013658	61.7647	59.6639
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.8043	77.1739	salmo_salar	ENSSSAP00000175893	57.5397	56.3492
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	79.8913	77.7174	salmo_salar	ENSSSAP00000121341	80.3279	78.1421
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.2609	77.1739	salmo_salar	ENSSSAP00000030153	83.7209	82.5581
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.8043	77.1739	salmo_trutta	ENSSTUP00000087032	63.8767	62.5551
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	79.8913	77.7174	salmo_trutta	ENSSTUP00000043587	80.3279	78.1421
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.2609	76.6304	salmo_trutta	ENSSTUP00000076403	79.1209	77.4725
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.1739	75.5435	salmo_trutta	ENSSTUP00000060391	83.0409	81.2866
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.4348	78.2609	gadus_morhua	ENSGMOP00000026453	70.4762	68.5714
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.0652	80.9783	fundulus_heteroclitus	ENSFHEP00000031093	90.9639	89.759
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	poecilia_reticulata	ENSPREP00000019120	73.5294	72.549
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	xiphophorus_maculatus	ENSXMAP00000024573	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.9783	79.3478	oryzias_latipes	ENSORLP00000028940	73.7624	72.2772
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	79.8913	cyclopterus_lumpus	ENSCLMP00005035889	75.3769	73.8693
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	oreochromis_niloticus	ENSONIP00000018563	89.2857	88.0952
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	83.1522	82.0652	haplochromis_burtoni	ENSHBUP00000010031	87.4286	86.2857
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	85.3261	82.0652	sparus_aurata	ENSSAUP00010065879	90.7514	87.2832
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	astatotilapia_calliptera	ENSACLP00000001035	89.2857	88.0952
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	83.1522	82.0652	lates_calcarifer	ENSLCAP00010021018	80.9524	79.8942
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.0652	80.9783	dicentrarchus_labrax	ENSDLAP00005011976	63.9831	63.1356
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.6087	82.0652	erpetoichthys_calabaricus	ENSECRP00000004663	90.4762	89.881
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.9783	79.8913	cyprinodon_variegatus	ENSCVAP00000012035	89.759	88.5542
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.9783	79.3478	oryzias_melastigma	ENSOMEP00000028899	89.759	87.9518
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	86.413	80.9783	takifugu_rubripes	ENSTRUP00000084721	72.6027	68.0365
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	neolamprologus_brichardi	ENSNBRP00000011631	89.2857	88.0952
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	kryptolebias_marmoratus	ENSKMAP00000021908	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	seriola_dumerili	ENSSDUP00000026166	84.2697	83.1461
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.4348	79.3478	pygocentrus_nattereri	ENSPNAP00000006671	89.1566	87.9518
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.0652	80.9783	poecilia_formosa	ENSPFOP00000015135	90.9639	89.759
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	83.1522	81.5217	scophthalmus_maximus	ENSSMAP00000061850	71.831	70.4225
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	cottoperca_gobio	ENSCGOP00000002524	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.0652	80.9783	poecilia_latipinna	ENSPLAP00000025397	90.9639	89.759
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	labrus_bergylta	ENSLBEP00000031800	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	83.1522	81.5217	amphilophus_citrinellus	ENSACIP00000013882	87.931	86.2069
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.8043	77.1739	hucho_hucho	ENSHHUP00000041288	84.7953	83.0409
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.1739	75.5435	hucho_hucho	ENSHHUP00000086547	83.0409	81.2866
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.1739	75.5435	hucho_hucho	ENSHHUP00000084159	65.7407	64.3519
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	86.413	84.7826	anabas_testudineus	ENSATEP00000055826	70.9821	69.6429
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.4348	77.1739	oncorhynchus_tshawytscha	ENSOTSP00005002637	64.0693	61.4719
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	70.6522	68.4783	oncorhynchus_tshawytscha	ENSOTSP00005039605	87.8378	85.1351
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.8043	77.1739	oncorhynchus_tshawytscha	ENSOTSP00005090180	84.7953	83.0409
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	77.1739	75.5435	oncorhynchus_tshawytscha	ENSOTSP00005088184	83.0409	81.2866
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	amphiprion_ocellaris	ENSAOCP00000016345	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.9783	sinocyclocheilus_grahami	ENSSGRP00000045038	90.3614	89.759
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.9783	sinocyclocheilus_grahami	ENSSGRP00000099014	76.9231	76.4103
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	79.8913	acanthochromis_polyacanthus	ENSAPOP00000007963	90.3614	88.5542
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	84.2391	83.1522	nothobranchius_furzeri	ENSNFUP00015024391	86.1111	85
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	maylandia_zebra	ENSMZEP00005002915	78.9474	77.8947
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.9783	79.3478	tetraodon_nigroviridis	ENSTNIP00000021477	89.759	87.9518
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	84.2391	82.0652	oryzias_javanicus	ENSOJAP00000007319	89.5954	87.2832
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.9783	80.4348	scleropages_formosus	ENSSFOP00015029895	89.759	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	betta_splendens	ENSBSLP00000000744	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	amphiprion_percula	ENSAPEP00000032535	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	79.8913	78.2609	hippocampus_comes	ENSHCOP00000000696	88.5542	86.747
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	78.2609	74.4565	mastacembelus_armatus	ENSMAMP00000005829	73.4694	69.898
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	80.9783	79.3478	oryzias_sinensis	ENSOSIP00000027941	73.7624	72.2772
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.6087	82.0652	denticeps_clupeoides	ENSDCDP00000029725	83.9779	83.4254
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	sander_lucioperca	ENSSLUP00000055945	90.3614	89.1566
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	75	73.913	cynoglossus_semilaevis	ENSCSEP00000026471	89.0323	87.7419
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	83.1522	82.0652	pundamilia_nyererei	ENSPNYP00000006496	86.4407	85.3107
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.0652	80.9783	myripristis_murdjan	ENSMMDP00005002094	90.9639	89.759
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	82.6087	82.0652	cyprinus_carpio_carpio	ENSCCRP00000038439	81.2834	80.7487
ENSPKIG00000003321	paramormyrops_kingsleyae	ENSPKIP00000017401	81.5217	80.4348	seriola_lalandi_dorsalis	ENSSLDP00000006441	90.3614	89.1566

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression