RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPFOG00000012545	Gene ID		Accession	-
Symbol	pelp1	Alias	-	Full Name	proline, glutamate and leucine rich protein 1
Status	Confidence	Length	12344 bases	Strand	Plus strand
Position	KI519824.1 : 378816 - 391159	RNA binding domain	RIX1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPFOP00000012534	RIX1	PF08167	7e-22	1
ENSPFOP00000025732	RIX1	PF08167	2.6e-16	1
ENSPFOP00000021129	RIX1	PF08167	2.8e-16	1
ENSPFOP00000030387	RIX1	PF08167	3.7e-16	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPFOT00000025669	4007	1235aa	ENSPFOP00000030387
-	ENSPFOT00000028721	3440	1034aa	ENSPFOP00000025732
-	ENSPFOT00000024628	3503	1055aa	ENSPFOP00000021129
-	ENSPFOT00000012551	2757	818aa	ENSPFOP00000012534

Gene Model

Click here to download ENSPFOG00000012545's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPFOG00000012545's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPFOG00000012545

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	91.8093	86.3081	fundulus_heteroclitus	ENSFHEP00000013458	59.1339	55.5905
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	98.7775	98.2885	poecilia_reticulata	ENSPREP00000005083	63.522	63.2075
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	83.8631	72.9829	oryzias_latipes	ENSORLP00000025999	54.9679	47.8365
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	96.2103	94.8655	xiphophorus_maculatus	ENSXMAP00000008181	62.0173	61.1505
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	86.9193	78.8509	oreochromis_niloticus	ENSONIP00000060864	54.6923	49.6154
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	85.6968	76.8949	cyclopterus_lumpus	ENSCLMP00005037070	54.3832	48.7975
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.4083	79.9511	sparus_aurata	ENSSAUP00010049532	56.1665	51.3747
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.4083	79.4621	dicentrarchus_labrax	ENSDLAP00005067058	54.6636	49.6942
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	85.4523	77.5061	lates_calcarifer	ENSLCAP00010026663	56.371	51.129
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	90.4645	84.1076	cyprinodon_variegatus	ENSCVAP00000016314	59.2949	55.1282
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	83.8631	72.3716	oryzias_melastigma	ENSOMEP00000004926	54.5744	47.0963
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	84.8411	74.5721	takifugu_rubripes	ENSTRUP00000016710	55.8776	49.1143
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.5306	79.7066	seriola_dumerili	ENSSDUP00000007461	55.9812	50.9773
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	85.4523	77.0171	cottoperca_gobio	ENSCGOP00000025460	55.5203	50.0397
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	81.2958	72.2494	hippocampus_comes	ENSHCOP00000018283	54.868	48.7624
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	83.3741	75.4279	sander_lucioperca	ENSSLUP00000049034	58.092	52.5554
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	80.1956	68.9487	cynoglossus_semilaevis	ENSCSEP00000010732	57.7974	49.6916
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	84.2298	72.7384	oryzias_javanicus	ENSOJAP00000049946	54.9442	47.4482
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.7751	79.9511	amphiprion_ocellaris	ENSAOCP00000008608	56.7589	51.6996
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	99.3888	99.2665	poecilia_latipinna	ENSPLAP00000028907	64.218	64.139
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.7751	79.9511	amphiprion_percula	ENSAPEP00000016015	56.58	51.5366
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.1638	78.8509	acanthochromis_polyacanthus	ENSAPOP00000028657	53.1297	48.0626
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	41.0758	36.6748	neolamprologus_brichardi	ENSNBRP00000003390	42.0526	37.5469
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	84.5966	76.4059	mastacembelus_armatus	ENSMAMP00000050600	54.9206	49.6032
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	89.3643	79.9511	kryptolebias_marmoratus	ENSKMAP00000009172	57.8323	51.7405
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	86.5526	78.9731	stegastes_partitus	ENSSPAP00000030917	58.0804	52.9943
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	78.4841	70.5379	maylandia_zebra	ENSMZEP00005029889	54.1315	48.6509
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	84.5966	76.6504	anabas_testudineus	ENSATEP00000004942	55.0079	49.841
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.6528	78.9731	larimichthys_crocea	ENSLCRP00005058150	56.8146	51.1886
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	85.0856	76.4059	betta_splendens	ENSBSLP00000001638	54.9329	49.3291
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.4083	79.7066	seriola_lalandi_dorsalis	ENSSLDP00000014493	56.0345	51.0972
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	87.7751	78.7286	nothobranchius_furzeri	ENSNFUP00015010312	58.6122	52.5714
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	85.4523	77.1394	pundamilia_nyererei	ENSPNYP00000022834	67.471	60.9073
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	82.6406	73.3496	labrus_bergylta	ENSLBEP00000002550	58.5789	51.9931
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	30.9291	13.6919	drosophila_melanogaster	FBpp0070044	36.1946	16.0229
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	71.6381	58.4352	lepisosteus_oculatus	ENSLOCP00000017366	46.5819	37.9968
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	75.1834	62.7139	clupea_harengus	ENSCHAP00000058412	49.3579	41.1717
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.4059	61.7359	danio_rerio	ENSDARP00000100297	51.5677	41.6667
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.5281	65.2812	astyanax_mexicanus	ENSAMXP00000041447	50.7705	43.309
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	77.2616	64.0587	carassius_auratus	ENSCARP00000035740	52.0593	43.1631
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.0391	62.2249	carassius_auratus	ENSCARP00000050583	51.0254	41.7555
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	77.3839	64.5477	ictalurus_punctatus	ENSIPUP00000006633	51.5892	43.0318
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.6504	63.9364	electrophorus_electricus	ENSEEEP00000024174	50.6053	42.2115
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	78.6064	67.7262	esox_lucius	ENSELUP00000010032	51.3989	44.2846
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	78.4841	68.0929	oncorhynchus_kisutch	ENSOKIP00005082533	52.7094	45.7307
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	78.6064	68.2152	oncorhynchus_mykiss	ENSOMYP00000120883	52.7915	45.8128
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	78.2396	67.6039	salmo_salar	ENSSSAP00000148517	51.7799	44.7411
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	62.3472	51.8337	salmo_salar	ENSSSAP00000158856	47.8424	39.7749
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	78.4841	67.4817	salmo_trutta	ENSSTUP00000031352	52.1951	44.878
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	72.2494	60.7579	gadus_morhua	ENSGMOP00000051892	51.1688	43.0303
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	52.3227	35.5746	xenopus_tropicalis	ENSXETP00000037530	42.0432	28.5855
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.4059	64.5477	pygocentrus_nattereri	ENSPNAP00000012731	50.8544	42.9618
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	52.2005	36.1858	leptobrachium_leishanense	ENSLLEP00000016194	40.6667	28.1905
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.6504	62.8362	sinocyclocheilus_grahami	ENSSGRP00000066011	51.69	42.3743
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.2836	63.2029	sinocyclocheilus_grahami	ENSSGRP00000075857	51.1895	42.4118
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	85.0856	75.3056	myripristis_murdjan	ENSMMDP00005017654	54.674	48.3896
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	77.5061	63.6919	denticeps_clupeoides	ENSDCDP00000007320	52.0953	42.8102
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	73.3496	60.2689	scleropages_formosus	ENSSFOP00015016407	47.619	39.127
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	72.8606	59.78	cyprinus_carpio_carpio	ENSCCRP00000109088	51.0711	41.9023
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	76.7726	63.6919	cyprinus_carpio_carpio	ENSCCRP00000143111	52.2898	43.3805
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	73.1051	62.5917	hucho_hucho	ENSHHUP00000087176	51.9548	44.4831
ENSPFOG00000012545	poecilia_formosa	ENSPFOP00000012534	78.6064	68.0929	hucho_hucho	ENSHHUP00000035495	52.1916	45.211

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression