RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPFOG00000011934	Gene ID	103152717	Accession	-
Symbol	si	Alias	-	Full Name	probable peptidyl-tRNA hydrolase 2
Status	Confidence	Length	4233 bases	Strand	Plus strand
Position	KI519934.1 : 36731 - 40963	RNA binding domain	PTH2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPFOP00000011925	PTH2	PF01981	2.1e-36	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
si:dkey-19e4.5-201	ENSPFOT00000011942	2752	185aa	ENSPFOP00000011925

Gene Model

Click here to download ENSPFOG00000011934's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPFOG00000011934's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000020108	46.8927	33.3333	poecilia_formosa	ENSPFOP00000011925	44.8649	31.8919

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	96.2162	91.3513	fundulus_heteroclitus	ENSFHEP00000016215	96.7391	91.8478
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	99.4595	98.9189	poecilia_reticulata	ENSPREP00000031019	100	99.4565
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	88.1081	82.7027	oryzias_latipes	ENSORLP00000012655	88.587	83.1522
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	98.9189	98.3784	xiphophorus_maculatus	ENSXMAP00000028394	99.4565	98.913
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	91.3513	84.3243	oreochromis_niloticus	ENSONIP00000074373	96.0227	88.6364
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	91.8919	86.4865	cyclopterus_lumpus	ENSCLMP00005001874	89.4737	84.2105
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.6757	88.6487	haplochromis_burtoni	ENSHBUP00000002679	96.1957	89.1304
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.6757	88.6487	astatotilapia_calliptera	ENSACLP00000039065	96.1957	89.1304
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	93.5135	87.5676	sparus_aurata	ENSSAUP00010002082	92.5134	86.631
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	93.5135	87.027	dicentrarchus_labrax	ENSDLAP00005080487	92.0213	85.6383
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.0541	88.1081	lates_calcarifer	ENSLCAP00010035512	88.7755	83.1633
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	96.2162	92.4324	cyprinodon_variegatus	ENSCVAP00000030224	96.7391	92.9348
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	80.5405	73.5135	oryzias_melastigma	ENSOMEP00000022191	74.8744	68.3417
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	90.8108	85.4054	takifugu_rubripes	ENSTRUP00000065933	92.3077	86.8132
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.1351	89.1892	seriola_dumerili	ENSSDUP00000011690	95.6522	89.6739
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	92.4324	87.5676	amphilophus_citrinellus	ENSACIP00000001779	96.6102	91.5254
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.6757	88.6487	cottoperca_gobio	ENSCGOP00000004330	96.1957	89.1304
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	90.2703	82.1622	hippocampus_comes	ENSHCOP00000023005	90.7609	82.6087
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	70.8108	65.4054	gasterosteus_aculeatus	ENSGACP00000015032	97.7612	90.2985
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	93.5135	87.027	sander_lucioperca	ENSSLUP00000009033	91.0526	84.7368
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	85.9459	80	oryzias_javanicus	ENSOJAP00000041747	85.0267	79.1444
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.6757	89.1892	scophthalmus_maximus	ENSSMAP00000037424	96.1957	89.6739
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.1351	89.7297	amphiprion_ocellaris	ENSAOCP00000023748	95.6522	90.2174
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	98.9189	98.9189	poecilia_latipinna	ENSPLAP00000025676	99.4565	99.4565
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.1351	89.7297	amphiprion_percula	ENSAPEP00000024019	95.6522	90.2174
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	88.1081	82.7027	oryzias_sinensis	ENSOSIP00000048043	88.587	83.1522
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.1351	89.7297	acanthochromis_polyacanthus	ENSAPOP00000031212	95.6522	90.2174
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	71.8919	58.3784	neolamprologus_brichardi	ENSNBRP00000024217	66.1692	53.7313
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.5946	87.5676	mastacembelus_armatus	ENSMAMP00000035254	95.1087	88.0435
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	91.8919	84.3243	kryptolebias_marmoratus	ENSKMAP00000024473	92.3913	84.7826
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.1351	90.2703	stegastes_partitus	ENSSPAP00000011598	95.6522	90.7609
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.6757	88.6487	maylandia_zebra	ENSMZEP00005007948	96.1957	89.1304
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	89.7297	82.1622	anabas_testudineus	ENSATEP00000056613	89.7297	82.1622
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	92.4324	87.027	larimichthys_crocea	ENSLCRP00005046464	90	84.7368
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	93.5135	87.5676	betta_splendens	ENSBSLP00000003635	94.0217	88.0435
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	82.1622	74.0541	seriola_lalandi_dorsalis	ENSSLDP00000022297	88.8889	80.117
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	88.6487	81.6216	nothobranchius_furzeri	ENSNFUP00015019714	94.2529	86.7816
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.6757	88.6487	pundamilia_nyererei	ENSPNYP00000009376	96.1957	89.1304
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	54.5946	39.4595	caenorhabditis_elegans	C24G6.8.1	31.962	23.1013
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	96.2162	89.1892	labrus_bergylta	ENSLBEP00000038233	96.7391	89.6739
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	68.1081	55.6757	callorhinchus_milii	ENSCMIP00000042496	70.7865	57.8652
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	78.9189	65.9459	latimeria_chalumnae	ENSLACP00000004164	78.4946	65.5914
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	93.5135	86.4865	lepisosteus_oculatus	ENSLOCP00000016833	94.0217	86.9565
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	95.6757	88.6487	clupea_harengus	ENSCHAP00000031547	96.1957	89.1304
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	91.8919	84.8649	danio_rerio	ENSDARP00000126273	89.9471	83.0688
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	92.4324	84.8649	astyanax_mexicanus	ENSAMXP00000016782	92.9348	85.3261
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	88.1081	82.7027	carassius_auratus	ENSCARP00000058390	93.1429	87.4286
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	89.1892	83.2432	carassius_auratus	ENSCARP00000007563	89.1892	83.2432
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	91.3513	84.3243	ictalurus_punctatus	ENSIPUP00000034616	91.8478	84.7826
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	91.8919	84.3243	electrophorus_electricus	ENSEEEP00000005316	92.3913	84.7826
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	92.973	87.5676	esox_lucius	ENSELUP00000012668	92.4731	87.0968
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.0541	88.6487	oncorhynchus_kisutch	ENSOKIP00005096417	92.5532	87.234
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	73.5135	64.3243	oncorhynchus_kisutch	ENSOKIP00005001600	60.7143	53.125
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.0541	88.6487	oncorhynchus_mykiss	ENSOMYP00000020162	93.0481	87.7005
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	85.4054	77.2973	oncorhynchus_mykiss	ENSOMYP00000095444	68.3983	61.9048
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.5946	87.027	salmo_salar	ENSSSAP00000153099	94.5946	87.027
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	91.3513	85.9459	salmo_salar	ENSSSAP00000093749	90.8602	85.4839
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.0541	88.6487	salmo_trutta	ENSSTUP00000087257	93.5484	88.172
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.5946	87.5676	salmo_trutta	ENSSTUP00000112019	94.5946	87.5676
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	90.8108	84.8649	gadus_morhua	ENSGMOP00000020007	90.3226	84.4086
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	63.7838	52.4324	sphenodon_punctatus	ENSSPUP00000012351	76.6234	62.987
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	69.1892	58.3784	laticauda_laticaudata	ENSLLTP00000007493	55.8952	47.1616
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	69.1892	58.3784	pseudonaja_textilis	ENSPTXP00000018614	67.0157	56.5445
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	77.8378	68.1081	xenopus_tropicalis	ENSXETP00000076281	74.2268	64.9485
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	89.7297	83.7838	erpetoichthys_calabaricus	ENSECRP00000032315	90.2174	84.2391
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	69.7297	59.4595	anolis_carolinensis	ENSACAP00000023187	69.3548	59.1398
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	69.1892	58.3784	naja_naja	ENSNNAP00000000429	67.0157	56.5445
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	92.4324	85.4054	pygocentrus_nattereri	ENSPNAP00000002745	92.9348	85.8696
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	70.8108	60.5405	podarcis_muralis	ENSPMRP00000031122	38.6431	33.0383
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	46.4865	35.6757	leptobrachium_leishanense	ENSLLEP00000028879	62.3188	47.8261
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	80	65.4054	leptobrachium_leishanense	ENSLLEP00000048150	72.1951	59.0244
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	88.6487	82.1622	sinocyclocheilus_grahami	ENSSGRP00000034990	93.7143	86.8571
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	88.6487	81.6216	sinocyclocheilus_grahami	ENSSGRP00000102074	93.7143	86.2857
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.5946	88.6487	myripristis_murdjan	ENSMMDP00005007310	95.1087	89.1304
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	70.8108	57.8378	salvator_merianae	ENSSMRP00000021234	70.8108	57.8378
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	83.2432	77.8378	paramormyrops_kingsleyae	ENSPKIP00000038524	83.6957	78.2609
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	71.8919	59.4595	chelonoidis_abingdonii	ENSCABP00000002282	76.4368	63.2184
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.5946	89.1892	denticeps_clupeoides	ENSDCDP00000059591	95.1087	89.6739
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	88.1081	80.5405	scleropages_formosus	ENSSFOP00015049733	87.1658	79.6791
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	58.9189	48.6486	terrapene_carolina_triunguis	ENSTMTP00000021558	82.5758	68.1818
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.5946	88.6487	hucho_hucho	ENSHHUP00000043090	94.5946	88.6487
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	84.8649	77.8378	hucho_hucho	ENSHHUP00000060905	74.0566	67.9245
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	71.8919	60	gopherus_evgoodei	ENSGEVP00005016308	77.3256	64.5349
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.0541	88.6487	oncorhynchus_tshawytscha	ENSOTSP00005060259	93.0481	87.7005
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	90.8108	83.7838	oncorhynchus_tshawytscha	ENSOTSP00005100927	88.4211	81.5789
ENSPFOG00000011934	poecilia_formosa	ENSPFOP00000011925	94.0541	88.6487	oncorhynchus_tshawytscha	ENSOTSP00005077126	93.0481	87.7005

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression