| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSPFOG00000002251 | Gene ID |
|
Accession |
- |
| Symbol |
calr3b |
Alias |
- |
Full Name |
calreticulin 3b |
| Status |
Confidence |
Length |
5861 bases |
Strand |
Minus strand |
| Position |
KI519761.1 : 849910 - 855770 |
RNA binding domain |
Calreticulin |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSPFOP00000002156 |
Calreticulin |
PF00262 |
6.7e-86 |
1 |
| ENSPFOP00000002156 |
Calreticulin |
PF00262 |
6.7e-86 |
2 |
| ENSPFOP00000028992 |
Calreticulin |
PF00262 |
2.4e-83 |
1 |
| ENSPFOP00000028992 |
Calreticulin |
PF00262 |
2.4e-83 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSPFOT00000025110 |
3183 |
418aa |
ENSPFOP00000028992 |
| - |
ENSPFOT00000002160 |
1783 |
392aa |
ENSPFOP00000002156 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000006037 | 78.2201 | 66.2763 | poecilia_formosa | ENSPFOP00000002156 | 85.2041 | 72.1939 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000016054 | 35.6923 | 24.7692 | poecilia_formosa | ENSPFOP00000002156 | 59.1837 | 41.0714 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000023595 | 37.401 | 26.6244 | poecilia_formosa | ENSPFOP00000002156 | 60.2041 | 42.8571 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 96.6837 | 93.3673 | fundulus_heteroclitus | ENSFHEP00000026864 | 90.8873 | 87.7698 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 98.9796 | 97.9592 | poecilia_reticulata | ENSPREP00000018198 | 92.823 | 91.866 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.1327 | 86.7347 | oryzias_latipes | ENSORLP00000022552 | 89.5631 | 82.5243 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.1327 | 91.5816 | xiphophorus_maculatus | ENSXMAP00000034683 | 82.7354 | 80.4933 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 95.9184 | 92.3469 | oreochromis_niloticus | ENSONIP00000073655 | 87.6457 | 84.3823 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.1327 | 89.2857 | cyclopterus_lumpus | ENSCLMP00005041706 | 87.0283 | 82.5472 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 95.1531 | 91.8367 | haplochromis_burtoni | ENSHBUP00000028911 | 88.5986 | 85.5107 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 95.4082 | 91.8367 | astatotilapia_calliptera | ENSACLP00000015702 | 88.6256 | 85.3081 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.6429 | 90.5612 | sparus_aurata | ENSSAUP00010067607 | 83.1839 | 79.5964 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.8775 | 89.2857 | lates_calcarifer | ENSLCAP00010036322 | 86.5882 | 82.3529 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 98.2143 | 93.8775 | cyprinodon_variegatus | ENSCVAP00000014845 | 91.4489 | 87.4109 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 82.6531 | 78.0612 | oryzias_melastigma | ENSOMEP00000029153 | 88.5246 | 83.6066 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.3673 | 89.0306 | takifugu_rubripes | ENSTRUP00000024065 | 86.1176 | 82.1176 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 96.1735 | 91.0714 | seriola_dumerili | ENSSDUP00000014345 | 89.5487 | 84.7981 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 92.8571 | 87.7551 | amphilophus_citrinellus | ENSACIP00000010291 | 88.9976 | 84.1076 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.6429 | 88.0102 | hippocampus_comes | ENSHCOP00000001490 | 89.1827 | 82.9327 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.1122 | 87.5 | gasterosteus_aculeatus | ENSGACP00000022325 | 87.9518 | 82.6506 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.3673 | 86.4796 | cynoglossus_semilaevis | ENSCSEP00000024406 | 86.1176 | 79.7647 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.8775 | 88.2653 | scophthalmus_maximus | ENSSMAP00000041269 | 86.7924 | 81.6038 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.3878 | 87.7551 | amphiprion_ocellaris | ENSAOCP00000001900 | 86.4486 | 80.3738 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 100 | 99.7449 | poecilia_latipinna | ENSPLAP00000003318 | 94.4578 | 94.2169 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.6429 | 87.7551 | amphiprion_percula | ENSAPEP00000031696 | 86.8852 | 80.5621 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.3878 | 87.2449 | oryzias_sinensis | ENSOSIP00000040466 | 89.8058 | 83.0097 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.8775 | 88.0102 | acanthochromis_polyacanthus | ENSAPOP00000022002 | 74.645 | 69.9797 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 95.4082 | 92.0918 | neolamprologus_brichardi | ENSNBRP00000016056 | 88.4161 | 85.3428 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.6429 | 89.2857 | mastacembelus_armatus | ENSMAMP00000006586 | 71.4836 | 67.4374 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 48.7245 | 44.1327 | stegastes_partitus | ENSSPAP00000017954 | 70.7407 | 64.0741 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 95.4082 | 91.8367 | maylandia_zebra | ENSMZEP00005032785 | 88.4161 | 85.1064 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.6225 | 88.7755 | anabas_testudineus | ENSATEP00000031160 | 85.1508 | 80.7425 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.1327 | 90.051 | larimichthys_crocea | ENSLCRP00005030137 | 85.023 | 81.3364 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 96.1735 | 91.0714 | betta_splendens | ENSBSLP00000055862 | 89.1253 | 84.3972 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 96.4286 | 90.8163 | seriola_lalandi_dorsalis | ENSSLDP00000012590 | 89.7862 | 84.5606 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.898 | 90.8163 | nothobranchius_furzeri | ENSNFUP00015010243 | 84.738 | 81.0934 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 95.4082 | 91.8367 | pundamilia_nyererei | ENSPNYP00000009842 | 88.6256 | 85.3081 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 75.7653 | 62.2449 | caenorhabditis_elegans | Y38A10A.5.1 | 75.1899 | 61.7722 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 94.898 | 88.2653 | labrus_bergylta | ENSLBEP00000022468 | 89.2086 | 82.9736 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 82.9082 | 66.3265 | petromyzon_marinus | ENSPMAP00000003021 | 76.1124 | 60.8899 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 84.4388 | 75 | callorhinchus_milii | ENSCMIP00000044200 | 79.759 | 70.8434 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 86.9898 | 78.8265 | latimeria_chalumnae | ENSLACP00000020782 | 81.9712 | 74.2788 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 90.5612 | 82.6531 | lepisosteus_oculatus | ENSLOCP00000004438 | 83.3333 | 76.0563 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 86.7347 | 74.7449 | clupea_harengus | ENSCHAP00000004633 | 76.9231 | 66.2896 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 90.3061 | 84.1837 | danio_rerio | ENSDARP00000135281 | 84.8921 | 79.1367 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 90.8163 | 83.9286 | astyanax_mexicanus | ENSAMXP00000015561 | 84.1608 | 77.7778 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 89.2857 | 83.9286 | carassius_auratus | ENSCARP00000049111 | 79.7267 | 74.9431 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 92.8571 | 85.9694 | carassius_auratus | ENSCARP00000082668 | 86.8735 | 80.4296 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 88.7755 | 81.6327 | carassius_auratus | ENSCARP00000083241 | 83.4532 | 76.7386 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 73.4694 | 65.051 | carassius_auratus | ENSCARP00000084939 | 79.3388 | 70.2479 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 91.5816 | 85.4592 | ictalurus_punctatus | ENSIPUP00000007845 | 84.6698 | 79.0094 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 91.8367 | 85.9694 | electrophorus_electricus | ENSEEEP00000000433 | 85.9189 | 80.4296 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 92.0918 | 83.1633 | esox_lucius | ENSELUP00000014024 | 86.7788 | 78.3654 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 92.0918 | 82.398 | oncorhynchus_kisutch | ENSOKIP00005085718 | 86.5707 | 77.458 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 92.0918 | 82.398 | oncorhynchus_mykiss | ENSOMYP00000004384 | 86.5707 | 77.458 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 87.7551 | 78.5714 | salmo_salar | ENSSSAP00000065694 | 81.7102 | 73.1591 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 88.7755 | 80.6122 | salmo_trutta | ENSSTUP00000103679 | 85.5037 | 77.6413 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 90.3061 | 82.9082 | gadus_morhua | ENSGMOP00000013388 | 83.4906 | 76.6509 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 84.4388 | 77.0408 | erpetoichthys_calabaricus | ENSECRP00000031366 | 83.3753 | 76.0705 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 90.8163 | 84.4388 | pygocentrus_nattereri | ENSPNAP00000035367 | 73.5537 | 68.3884 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 46.9388 | 29.5918 | saccharomyces_cerevisiae | YAL058W | 36.6534 | 23.1076 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 88.0102 | 80.102 | sinocyclocheilus_grahami | ENSSGRP00000009481 | 71.281 | 64.876 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 89.0306 | 80.6122 | sinocyclocheilus_grahami | ENSSGRP00000081943 | 72.5572 | 65.6965 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 93.3673 | 86.9898 | myripristis_murdjan | ENSMMDP00005028478 | 87.1429 | 81.1905 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 88.7755 | 79.8469 | paramormyrops_kingsleyae | ENSPKIP00000012641 | 84.466 | 75.9709 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 88.5204 | 78.8265 | paramormyrops_kingsleyae | ENSPKIP00000028736 | 83.6145 | 74.4578 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 90.3061 | 83.1633 | denticeps_clupeoides | ENSDCDP00000025257 | 84.0855 | 77.4347 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 89.0306 | 80.102 | scleropages_formosus | ENSSFOP00015012379 | 75.705 | 68.1128 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 84.4388 | 76.7857 | scleropages_formosus | ENSSFOP00015046845 | 74.382 | 67.6404 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 89.5408 | 82.6531 | cyprinus_carpio_carpio | ENSCCRP00000157544 | 83.7709 | 77.327 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 90.051 | 81.6327 | cyprinus_carpio_carpio | ENSCCRP00000151267 | 83.848 | 76.0095 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 92.8571 | 82.9082 | hucho_hucho | ENSHHUP00000078118 | 79.1304 | 70.6522 |
| ENSPFOG00000002251 | poecilia_formosa | ENSPFOP00000002156 | 92.3469 | 82.398 | oncorhynchus_tshawytscha | ENSOTSP00005037564 | 86.1905 | 76.9048 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
