RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPEMG00000015563	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2721 bases	Strand	Plus strand
Position	5 : 39637962 - 39640682	RNA binding domain	RNase_PH
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPEMP00000016291	RNase_PH	PF01138	4.3e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPEMT00000020601	339	112aa	ENSPEMP00000016291

Gene Model

Click here to download ENSPEMG00000015563's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPEMG00000015563's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPEMG00000015563

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPEMG00000015563	peromyscus_maniculatus_bairdii	ENSPEMP00000016291	47.3214	41.9643	vombatus_ursinus	ENSVURP00010000124	60.2273	53.4091

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression