RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPCTG00005015848	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3831 bases	Strand	Minus strand
Position	ML165375.1 : 363 - 4193	RNA binding domain	Ribosomal_L13e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCTP00005022153	Ribosomal_L13e	PF01294	3.2e-70	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCTT00005024406	642	213aa	ENSPCTP00005022153

Gene Model

Click here to download ENSPCTG00005015848's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCTG00005015848's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCTG00005015848	physeter_catodon	ENSPCTP00005013354	31.3846	21.5385	physeter_catodon	ENSPCTP00005022153	47.8873	32.8638
ENSPCTG00005015848	physeter_catodon	ENSPCTP00005022847	52.1368	39.3162	physeter_catodon	ENSPCTP00005022153	28.6385	21.5962

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCTG00005015848	physeter_catodon	ENSPCTP00005022153	53.5211	38.9671	saccharomyces_cerevisiae	YDL082W	57.2864	41.7085
ENSPCTG00005015848	physeter_catodon	ENSPCTP00005022153	53.5211	38.9671	saccharomyces_cerevisiae	YMR142C	57.2864	41.7085

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression