RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPCTG00005006830	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	246 bases	Strand	Plus strand
Position	15 : 40711251 - 40711496	RNA binding domain	Ribosomal_S10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCTP00005009624	Ribosomal_S10	PF00338	5.4e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCTT00005010615	246	81aa	ENSPCTP00005009624

Gene Model

Click here to download ENSPCTG00005006830's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCTG00005006830's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009784	59.6639	57.1429	physeter_catodon	ENSPCTP00005009624	87.6543	83.9506
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005019970	57.9832	52.9412	physeter_catodon	ENSPCTP00005009624	85.1852	77.7778
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005017137	47.3282	41.2214	physeter_catodon	ENSPCTP00005009624	76.5432	66.6667
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005032042	56.3025	51.2605	physeter_catodon	ENSPCTP00005009624	82.716	75.3086
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005006537	28.125	21.875	physeter_catodon	ENSPCTP00005009624	22.2222	17.284
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005020737	57.9832	54.6218	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005005219	30.1587	23.8095	physeter_catodon	ENSPCTP00005009624	23.4568	18.5185
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005012426	28.125	20.3125	physeter_catodon	ENSPCTP00005009624	22.2222	16.0494

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	80.2469	80.2469	papio_anubis	ENSPANP00000051739	79.2683	79.2683
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	79.0123	79.0123	papio_anubis	ENSPANP00000049555	69.5652	69.5652
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	79.0123	77.7778	pongo_abelii	ENSPPYP00000031367	71.1111	70
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	77.7778	75.3086	pongo_abelii	ENSPPYP00000033605	81.8182	79.2208
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	80.2469	76.5432	ictidomys_tridecemlineatus	ENSSTOP00000026968	58.0357	55.3571
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	90.1235	86.4198	balaenoptera_musculus	ENSBMSP00010020855	57.9365	55.5556
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	86.4198	82.716	monodelphis_domestica	ENSMODP00000049374	58.8235	56.3025
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	77.7778	77.7778	saimiri_boliviensis_boliviensis	ENSSBOP00000040160	77.7778	77.7778
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	75.3086	70.3704	saimiri_boliviensis_boliviensis	ENSSBOP00000028572	69.3182	64.7727
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	67.9012	67.9012	vombatus_ursinus	ENSVURP00010008377	91.6667	91.6667
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	80.2469	74.0741	vombatus_ursinus	ENSVURP00010017468	61.3208	56.6038
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	71.6049	70.3704	canis_lupus_dingo	ENSCAFP00020019523	78.3784	77.027
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	79.0123	77.7778	bos_taurus	ENSBTAP00000061658	67.3684	66.3158
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	79.0123	77.7778	bison_bison_bison	ENSBBBP00000021496	67.3684	66.3158
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	80.2469	76.5432	oryctolagus_cuniculus	ENSOCUP00000038713	67.0103	63.9175
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	79.0123	77.7778	bos_indicus_hybrid	ENSBIXP00005014431	67.3684	66.3158
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	69.1358	65.4321	prolemur_simus	ENSPSMP00000005067	75.6757	71.6216
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	69.1358	55.5556	caenorhabditis_elegans	Y105E8A.16.1	47.8632	38.4615
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	72.8395	60.4938	drosophila_melanogaster	FBpp0083371	49.1667	40.8333
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	76.5432	62.963	ciona_intestinalis	ENSCINP00000001547	48.4375	39.8438
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	77.7778	66.6667	petromyzon_marinus	ENSPMAP00000005542	52.5	45
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	75.3086	67.9012	eptatretus_burgeri	ENSEBUP00000018480	54.4643	49.1071
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	callorhinchus_milii	ENSCMIP00000038698	45.6376	43.6242
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	lepisosteus_oculatus	ENSLOCP00000006538	57.1429	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	86.4198	82.716	latimeria_chalumnae	ENSLACP00000004740	58.8235	56.3025
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	66.6667	61.7284	clupea_harengus	ENSCHAP00000027151	50	46.2963
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	75.3086	70.3704	carassius_auratus	ENSCARP00000113716	55.4545	51.8182
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	carassius_auratus	ENSCARP00000019372	54.4	51.2
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	82.716	76.5432	astyanax_mexicanus	ENSAMXP00000042426	57.265	52.9915
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	ictalurus_punctatus	ENSIPUP00000024306	55.2	52
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	79.0123	electrophorus_electricus	ENSEEEP00000003252	47.5862	44.1379
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	esox_lucius	ENSELUP00000062835	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	oncorhynchus_kisutch	ENSOKIP00005013202	41.7178	39.8773
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	oncorhynchus_mykiss	ENSOMYP00000014693	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	salmo_salar	ENSSSAP00000096620	47.5862	45.5172
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	salmo_trutta	ENSSTUP00000052373	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	salmo_trutta	ENSSTUP00000053502	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	gadus_morhua	ENSGMOP00000038743	57.1429	53.7815
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	fundulus_heteroclitus	ENSFHEP00000032677	57.1429	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	poecilia_reticulata	ENSPREP00000013351	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	xiphophorus_maculatus	ENSXMAP00000032285	57.9832	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	cyclopterus_lumpus	ENSCLMP00005031772	57.1429	53.7815
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	oreochromis_niloticus	ENSONIP00000061295	43.3121	40.7643
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	sparus_aurata	ENSSAUP00010005457	56.1983	53.719
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	lates_calcarifer	ENSLCAP00010056602	56.6667	54.1667
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	chrysemys_picta_bellii	ENSCPBP00000006121	51.5152	48.4848
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	crocodylus_porosus	ENSCPRP00005023530	56.6667	54.1667
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	laticauda_laticaudata	ENSLLTP00000006691	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	gallus_gallus	ENSGALP00010005591	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	82.716	79.0123	meleagris_gallopavo	ENSMGAP00000011466	56.7797	54.2373
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	parus_major	ENSPMJP00000021169	55.2846	52.8455
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	anabas_testudineus	ENSATEP00000052232	45.9459	43.9189
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	takifugu_rubripes	ENSTRUP00000056495	35.3846	33.3333
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	23.4568	19.7531	cyprinodon_variegatus	ENSCVAP00000031592	29.6875	25
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	geospiza_fortis	ENSGFOP00000004431	57.6271	55.0847
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	62.963	41.9753	saccharomyces_cerevisiae	YHL015W	42.1488	28.0992
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	amphiprion_ocellaris	ENSAOCP00000005195	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	aquila_chrysaetos_chrysaetos	ENSACCP00020006093	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	kryptolebias_marmoratus	ENSKMAP00000005348	37.7049	35.5191
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	86.4198	82.716	oryzias_melastigma	ENSOMEP00000016981	41.9162	40.1198
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	larimichthys_crocea	ENSLCRP00005060267	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	anolis_carolinensis	ENSACAP00000025409	57.6271	54.2373
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	chelonoidis_abingdonii	ENSCABP00000006916	57.9832	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	acanthochromis_polyacanthus	ENSAPOP00000000710	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	82.716	79.0123	seriola_dumerili	ENSSDUP00000007734	56.3025	53.7815
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	scleropages_formosus	ENSSFOP00015072098	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	86.4198	81.4815	gopherus_evgoodei	ENSGEVP00005000043	58.8235	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	salvator_merianae	ENSSMRP00000013256	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	dicentrarchus_labrax	ENSDLAP00005044303	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	terrapene_carolina_triunguis	ENSTMTP00000019057	57.9832	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	erpetoichthys_calabaricus	ENSECRP00000007578	56.6667	54.1667
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	81.4815	77.7778	nothobranchius_furzeri	ENSNFUP00015034434	56.4103	53.8462
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	75.3086	70.3704	neolamprologus_brichardi	ENSNBRP00000010965	55.4545	51.8182
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	hucho_hucho	ENSHHUP00000006333	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	labrus_bergylta	ENSLBEP00000037926	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	77.7778	gasterosteus_aculeatus	ENSGACP00000002531	54.4	50.4
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	amphiprion_percula	ENSAPEP00000010962	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	poecilia_formosa	ENSPFOP00000012053	37.2973	35.6757
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	79.0123	denticeps_clupeoides	ENSDCDP00000011142	57.9832	53.7815
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	71.6049	71.6049	podarcis_muralis	ENSPMRP00000034520	59.1837	59.1837
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	scophthalmus_maximus	ENSSMAP00000047564	35.3846	33.3333
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	strigops_habroptila	ENSSHBP00005004394	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	86.4198	82.716	oryzias_javanicus	ENSOJAP00000043650	32.7103	31.3084
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	struthio_camelus_australis	ENSSCUP00000010243	47.8873	45.7746
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	74.0741	62.963	seriola_lalandi_dorsalis	ENSSLDP00000003282	48.7805	41.4634
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	23.4568	19.7531	sinocyclocheilus_grahami	ENSSGRP00000005169	29.6875	25
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	oncorhynchus_tshawytscha	ENSOTSP00005005238	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	oncorhynchus_tshawytscha	ENSOTSP00005056031	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	oncorhynchus_tshawytscha	ENSOTSP00005048534	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	coturnix_japonica	ENSCJPP00005012217	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	betta_splendens	ENSBSLP00000035232	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	leptobrachium_leishanense	ENSLLEP00000011100	54.8387	51.6129
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	80.2469	ficedula_albicollis	ENSFALP00000010727	57.6271	55.0847
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	myripristis_murdjan	ENSMMDP00005010496	57.9832	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	paramormyrops_kingsleyae	ENSPKIP00000029138	50.3704	47.4074
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	80.2469	hippocampus_comes	ENSHCOP00000009280	57.9832	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	82.716	77.7778	pelodiscus_sinensis	ENSPSIP00000020084	57.265	53.8462
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	86.4198	80.2469	pygocentrus_nattereri	ENSPNAP00000032800	58.8235	54.6218
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	cottoperca_gobio	ENSCGOP00000005072	38.1215	36.4641
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	taeniopygia_guttata	ENSTGUP00000011438	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	sander_lucioperca	ENSSLUP00000020060	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	poecilia_latipinna	ENSPLAP00000031006	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	cyprinus_carpio_carpio	ENSCCRP00000150026	43.038	40.5063
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	79.0123	cyprinus_carpio_carpio	ENSCCRP00000174603	56.6667	53.3333
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	83.9506	77.7778	oryzias_sinensis	ENSOSIP00000010720	40.4762	37.5
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	mastacembelus_armatus	ENSMAMP00000024426	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	85.1852	81.4815	tetraodon_nigroviridis	ENSTNIP00000001041	57.9832	55.4622
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	76.5432	70.3704	maylandia_zebra	ENSMZEP00005033469	54.386	50
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	76.5432	70.3704	maylandia_zebra	ENSMZEP00005005123	54.386	50
ENSPCTG00005006830	physeter_catodon	ENSPCTP00005009624	75.3086	70.3704	maylandia_zebra	ENSMZEP00005029716	55.4545	51.8182

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression