RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPCOG00000026211	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2576 bases	Strand	Plus strand
Position	KQ025180.1 : 1472424 - 1474999	RNA binding domain	Ribosomal_S9
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCOP00000027439	Ribosomal_S9	PF00380	1.9e-33	1
ENSPCOP00000027441	Ribosomal_S9	PF00380	1e-24	1
ENSPCOP00000027438	Ribosomal_S9	PF00380	1.1e-12	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCOT00000038255	702	149aa	ENSPCOP00000027438
-	ENSPCOT00000038256	616	146aa	ENSPCOP00000027439
-	ENSPCOT00000038258	390	129aa	ENSPCOP00000027441

Gene Model

Click here to download ENSPCOG00000026211's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCOG00000026211's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000003944	52.6316	49.3421	propithecus_coquereli	ENSPCOP00000027438	53.6913	50.3356
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000014141	13.079	9.26431	propithecus_coquereli	ENSPCOP00000027438	32.2148	22.8188

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	56.3758	53.6913	sarcophilus_harrisii	ENSSHAP00000029547	57.1429	54.4218
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	79.1946	76.5101	notamacropus_eugenii	ENSMEUP00000009468	81.9444	79.1667
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	81.8792	79.8658	choloepus_hoffmanni	ENSCHOP00000001680	81.8792	79.8658
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	81.2081	78.5235	echinops_telfairi	ENSETEP00000012395	81.7568	79.0541
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	88.5906	86.5772	macaca_fascicularis	ENSMFAP00000039695	87.4172	85.4305
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	88.5906	86.5772	papio_anubis	ENSPANP00000021526	87.4172	85.4305
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	87.9195	86.5772	pongo_abelii	ENSPPYP00000039854	86.1842	84.8684
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	81.2081	80.5369	vulpes_vulpes	ENSVVUP00000008290	60.804	60.3015
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	53.6913	49.6644	ailuropoda_melanoleuca	ENSAMEP00000036385	83.3333	77.0833
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	85.2349	83.2215	ursus_americanus	ENSUAMP00000025755	81.4103	79.4872
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	83.8926	81.2081	tursiops_truncatus	ENSTTRP00000003344	81.6993	79.085
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	83.8926	81.2081	physeter_catodon	ENSPCTP00005013578	82.2368	79.6053
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	84.5638	82.5503	balaenoptera_musculus	ENSBMSP00010028759	82.8947	80.9211
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	83.2215	80.5369	procavia_capensis	ENSPCAP00000009943	81.5789	78.9474
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	85.906	82.5503	sus_scrofa	ENSSSCP00000027401	84.7682	81.457
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	59.0604	53.6913	oryctolagus_cuniculus	ENSOCUP00000041190	53.9877	49.0798
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	57.7181	55.7047	mus_spicilegus	ENSMSIP00000028105	73.5043	70.9402
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	54.3624	51.0067	mus_spicilegus	ENSMSIP00000011386	72.973	68.4685
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	53.6913	51.6779	rattus_norvegicus	ENSRNOP00000084911	72.0721	69.3694
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	56.3758	54.3624	monodelphis_domestica	ENSMODP00000046223	73.6842	71.0526
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	51.6779	45.6376	vombatus_ursinus	ENSVURP00010015760	47.5309	41.9753
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	85.2349	83.2215	ursus_maritimus	ENSUMAP00000026860	81.4103	79.4872
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	57.7181	54.3624	aotus_nancymaae	ENSANAP00000029404	75.4386	71.0526
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	84.5638	82.5503	phocoena_sinus	ENSPSNP00000029209	82.8947	80.9211
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	81.2081	79.1946	sorex_araneus	ENSSARP00000000789	80.6667	78.6667
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	81.8792	80.5369	catagonus_wagneri	ENSCWAP00000020371	81.3333	80
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	57.7181	55.7047	bison_bison_bison	ENSBBBP00000026283	60.1399	58.042
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	88.5906	86.5772	rhinopithecus_bieti	ENSRBIP00000020991	87.4172	85.4305
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	85.2349	84.5638	prolemur_simus	ENSPSMP00000033592	84.106	83.4437
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	53.6913	45.6376	caenorhabditis_elegans	T01C3.6.1	55.5556	47.2222
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	57.047	48.9933	drosophila_melanogaster	FBpp0309759	57.4324	49.3243
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	54.3624	45.6376	ciona_intestinalis	ENSCINP00000034355	54.7297	45.9459
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	57.047	50.3356	eptatretus_burgeri	ENSEBUP00000010798	50.8982	44.9102
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	42.2819	36.2416	callorhinchus_milii	ENSCMIP00000010575	55.2632	47.3684
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	56.3758	clupea_harengus	ENSCHAP00000058611	60.9272	55.6291
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	56.3758	danio_rerio	ENSDARP00000066897	63.0137	57.5342
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	carassius_auratus	ENSCARP00000016358	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	54.3624	astyanax_mexicanus	ENSAMXP00000052997	63.0137	55.4795
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	56.3758	ictalurus_punctatus	ENSIPUP00000036579	61.0738	56.3758
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	55.7047	electrophorus_electricus	ENSEEEP00000029973	62.3288	56.8493
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	62.4161	57.7181	esox_lucius	ENSELUP00000000973	31.6327	29.2517
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	oncorhynchus_kisutch	ENSOKIP00005096950	59.3548	55.4839
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	oncorhynchus_kisutch	ENSOKIP00005025295	63.0137	58.9041
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	oncorhynchus_mykiss	ENSOMYP00000031938	61.745	57.7181
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	oncorhynchus_mykiss	ENSOMYP00000019305	40.8889	38.2222
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	salmo_salar	ENSSSAP00000124807	55.7576	52.1212
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	salmo_salar	ENSSSAP00000151853	44.4444	41.5459
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	salmo_trutta	ENSSTUP00000060694	61.745	57.7181
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	salmo_trutta	ENSSTUP00000074212	63.0137	58.9041
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	fundulus_heteroclitus	ENSFHEP00000033998	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	poecilia_reticulata	ENSPREP00000033170	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	xiphophorus_maculatus	ENSXMAP00000036022	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	56.3758	cyclopterus_lumpus	ENSCLMP00005049843	61.745	56.3758
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	haplochromis_burtoni	ENSHBUP00000010323	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	astatotilapia_calliptera	ENSACLP00000026419	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	sparus_aurata	ENSSAUP00010048334	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	lates_calcarifer	ENSLCAP00010006254	55.4217	51.2048
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	xenopus_tropicalis	ENSXETP00000040775	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	58.3893	56.3758	laticauda_laticaudata	ENSLLTP00000013850	56.129	54.1936
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	55.7047	cyprinodon_variegatus	ENSCVAP00000028979	62.3288	56.8493
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	54.3624	takifugu_rubripes	ENSTRUP00000061221	62.3288	55.4795
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	oryzias_melastigma	ENSOMEP00000002905	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	neolamprologus_brichardi	ENSNBRP00000013756	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	kryptolebias_marmoratus	ENSKMAP00000016392	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	seriola_dumerili	ENSSDUP00000025162	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	55.7047	pygocentrus_nattereri	ENSPNAP00000006609	62.3288	56.8493
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	poecilia_formosa	ENSPFOP00000017588	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	poecilia_latipinna	ENSPLAP00000024868	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	52.349	42.2819	ciona_savignyi	ENSCSAVP00000014787	54.1667	43.75
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	56.3758	labrus_bergylta	ENSLBEP00000029061	63.0137	57.5342
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	56.3758	cottoperca_gobio	ENSCGOP00000013154	63.0137	57.5342
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	amphilophus_citrinellus	ENSACIP00000017159	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	hucho_hucho	ENSHHUP00000074921	50.5494	47.2527
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	hucho_hucho	ENSHHUP00000070277	63.0137	58.9041
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	anabas_testudineus	ENSATEP00000033761	61.745	57.047
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	oncorhynchus_tshawytscha	ENSOTSP00005039317	61.745	57.7181
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.7181	oncorhynchus_tshawytscha	ENSOTSP00005008292	61.745	57.7181
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	57.7181	amphiprion_ocellaris	ENSAOCP00000008454	84.2593	79.6296
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	gasterosteus_aculeatus	ENSGACP00000026436	58.2278	53.7975
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	acanthochromis_polyacanthus	ENSAPOP00000031541	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	54.3624	tetraodon_nigroviridis	ENSTNIP00000015624	58.7097	52.2581
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	sinocyclocheilus_grahami	ENSSGRP00000026196	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	sinocyclocheilus_grahami	ENSSGRP00000083133	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	nothobranchius_furzeri	ENSNFUP00015037334	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	maylandia_zebra	ENSMZEP00005002493	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	oryzias_javanicus	ENSOJAP00000049063	41.629	38.4615
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	amphiprion_percula	ENSAPEP00000029857	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	stegastes_partitus	ENSSPAP00000010633	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	57.047	55.0336	chelonoidis_abingdonii	ENSCABP00000027548	70.2479	67.7686
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	mastacembelus_armatus	ENSMAMP00000022621	61.745	57.047
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	larimichthys_crocea	ENSLCRP00005047760	61.745	57.047
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	56.3758	betta_splendens	ENSBSLP00000016786	61.745	56.3758
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.0738	55.7047	hippocampus_comes	ENSHCOP00000014392	62.3288	56.8493
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	64.4295	57.7181	denticeps_clupeoides	ENSDCDP00000043072	54.8571	49.1429
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	pundamilia_nyererei	ENSPNYP00000024262	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	55.7047	sander_lucioperca	ENSSLUP00000005204	61.745	55.7047
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	myripristis_murdjan	ENSMMDP00005045280	63.0137	58.2192
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	56.3758	paramormyrops_kingsleyae	ENSPKIP00000018430	63.0137	57.5342
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	55.0336	paramormyrops_kingsleyae	ENSPKIP00000015011	63.0137	56.1644
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	48.9933	34.8993	saccharomyces_cerevisiae	YMR143W	51.049	36.3636
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	48.9933	34.8993	saccharomyces_cerevisiae	YDL083C	51.049	36.3636
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	cyprinus_carpio_carpio	ENSCCRP00000059493	41.2556	38.1166
ENSPCOG00000026211	propithecus_coquereli	ENSPCOP00000027438	61.745	57.047	seriola_lalandi_dorsalis	ENSSLDP00000024395	63.0137	58.2192

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression