RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPCOG00000014063	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1556 bases	Strand	Minus strand
Position	KQ029282.1 : 10374066 - 10375621	RNA binding domain	Ribosomal_S5_C , Ribosomal_S5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCOP00000006012	Ribosomal_S5_C	PF03719	1.9e-21	1
ENSPCOP00000006012	Ribosomal_S5	PF00333	1.5e-13	2
ENSPCOP00000006008	Ribosomal_S5_C	PF03719	1.9e-21	1
ENSPCOP00000006008	Ribosomal_S5	PF00333	1.5e-13	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCOT00000016484	906	301aa	ENSPCOP00000006008
-	ENSPCOT00000016490	897	298aa	ENSPCOP00000006012

Gene Model

Click here to download ENSPCOG00000014063's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCOG00000014063's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000005800	85.4077	79.8283	propithecus_coquereli	ENSPCOP00000006008	66.113	61.794
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000000701	70	64.8	propithecus_coquereli	ENSPCOP00000006008	58.1395	53.8206

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	44.5183	39.5349	dasypus_novemcinctus	ENSDNOP00000031417	64.7343	57.4879
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	46.5116	40.8638	dasypus_novemcinctus	ENSDNOP00000023589	67.3077	59.1346
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	38.5382	30.5648	erinaceus_europaeus	ENSEEUP00000012140	67.8363	53.8012
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	56.1462	48.505	echinops_telfairi	ENSETEP00000006673	61.0108	52.7076
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	58.4718	54.8173	callithrix_jacchus	ENSCJAP00000083390	72.1311	67.6229
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.8073	54.1528	cercocebus_atys	ENSCATP00000015598	78.0269	73.0942
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	59.1362	55.814	macaca_mulatta	ENSMMUP00000041218	70.0787	66.1417
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	59.1362	52.8239	macaca_nemestrina	ENSMNEP00000015235	63.1206	56.383
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	52.4917	47.8405	macaca_nemestrina	ENSMNEP00000039391	72.4771	66.055
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.8073	53.4884	macaca_nemestrina	ENSMNEP00000003154	75.6522	70
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	59.1362	55.814	mandrillus_leucophaeus	ENSMLEP00000039427	70.9163	66.9323
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	63.7874	59.4684	pan_paniscus	ENSPPAP00000005886	75.8893	70.751
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	64.1196	60.4651	pan_troglodytes	ENSPTRP00000078168	73.384	69.2015
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	56.1462	51.8272	pan_troglodytes	ENSPTRP00000093675	73.1602	67.5325
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.8073	54.8173	vulpes_vulpes	ENSVVUP00000021431	70.7317	67.0732
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	53.1561	48.8372	physeter_catodon	ENSPCTP00005006696	74.4186	68.3721
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	53.8206	49.8339	balaenoptera_musculus	ENSBMSP00010017819	68.9362	63.8298
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	45.8472	38.5382	loxodonta_africana	ENSLAFP00000024485	63.3028	53.211
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	43.1894	37.5415	loxodonta_africana	ENSLAFP00000023922	59.9078	52.0737
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	51.8272	42.1927	loxodonta_africana	ENSLAFP00000022090	67.5325	54.9784
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.4751	52.8239	equus_asinus	ENSEASP00005020880	69.4779	63.8554
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.4751	52.4917	equus_caballus	ENSECAP00000038629	68.6508	62.6984
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	68.7708	65.1163	ovis_aries_rambouillet	ENSOARP00020012614	75.5474	71.5328
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	59.4684	54.8173	dipodomys_ordii	ENSDORP00000027026	71.3147	65.7371
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	56.4784	52.4917	oryctolagus_cuniculus	ENSOCUP00000044222	74.8899	69.6035
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	53.8206	49.8339	oryctolagus_cuniculus	ENSOCUP00000042514	51.7572	47.9233
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	66.113	62.1262	cricetulus_griseus_chok1gshd	ENSCGRP00001004846	76.834	72.2008
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	66.4452	63.1229	cricetulus_griseus_chok1gshd	ENSCGRP00001007158	83.3333	79.1667
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	58.4718	54.1528	cricetulus_griseus_chok1gshd	ENSCGRP00001025049	71.5447	66.2602
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	68.4385	64.784	mesocricetus_auratus	ENSMAUP00000009939	82.4	78
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.4751	53.8206	mesocricetus_auratus	ENSMAUP00000004575	78.9954	73.9726
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	51.495	46.5116	mesocricetus_auratus	ENSMAUP00000001284	77.5	70
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	38.206	35.2159	mus_pahari	MGP_PahariEiJ_P0032823	81.5603	75.1773
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	55.814	52.1595	mus_spicilegus	ENSMSIP00000030845	71.4894	66.8085
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	58.804	55.4817	mus_spicilegus	ENSMSIP00000001355	75.3191	71.0638
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	48.1728	44.186	cavia_porcellus	ENSCPOP00000026921	74.7423	68.5567
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	62.7907	60.1329	rattus_norvegicus	ENSRNOP00000004583	81.1159	77.6824
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	54.8173	51.495	octodon_degus	ENSODEP00000004358	70.8155	66.5236
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	58.804	53.4884	vombatus_ursinus	ENSVURP00010004747	72.2449	65.7143
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	54.4851	50.8306	chinchilla_lanigera	ENSCLAP00000017360	73.2143	68.3036
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	49.8339	46.8439	chinchilla_lanigera	ENSCLAP00000001051	68.4931	64.3836
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	55.1495	49.8339	chinchilla_lanigera	ENSCLAP00000012246	68.595	61.9835
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	64.784	59.4684	chinchilla_lanigera	ENSCLAP00000007636	71.9557	66.0517
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	59.8007	56.4784	microcebus_murinus	ENSMICP00000037963	75.9494	71.73
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	49.1694	47.5083	tupaia_belangeri	ENSTBEP00000005781	88.0952	85.119
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	58.804	54.4851	phascolarctos_cinereus	ENSPCIP00000003203	78.6667	72.8889
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	63.4552	58.4718	aotus_nancymaae	ENSANAP00000039348	74.031	68.2171
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.4751	54.1528	saimiri_boliviensis_boliviensis	ENSSBOP00000023426	71.1934	67.0782
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	58.804	51.8272	jaculus_jaculus	ENSJJAP00000004950	71.0843	62.6506
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	28.9037	24.5847	myotis_lucifugus	ENSMLUP00000021185	67.4419	57.3643
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	54.8173	47.1761	myotis_lucifugus	ENSMLUP00000021073	65.7371	56.5737
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.4751	50.8306	myotis_lucifugus	ENSMLUP00000017079	73.617	65.1064
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	47.5083	40.8638	myotis_lucifugus	ENSMLUP00000020020	68.0952	58.5714
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	54.4851	50.1661	sciurus_vulgaris	ENSSVLP00005027528	66.129	60.8871
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	54.1528	50.4983	sciurus_vulgaris	ENSSVLP00005024872	60.8209	56.7164
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	47.5083	44.186	sciurus_vulgaris	ENSSVLP00005013968	66.5116	61.8605
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	57.1429	52.8239	rhinopithecus_roxellana	ENSRROP00000031413	75.1092	69.4323
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	55.1495	51.1628	rhinopithecus_bieti	ENSRBIP00000013517	72.4891	67.2489
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	53.4884	48.8372	rhinopithecus_bieti	ENSRBIP00000030734	75.2336	68.6916
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	56.8106	52.1595	microtus_ochrogaster	ENSMOCP00000010434	71.8487	65.9664
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	55.814	51.8272	microtus_ochrogaster	ENSMOCP00000000264	72.103	66.9528
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	50.1661	47.1761	microtus_ochrogaster	ENSMOCP00000010453	75.1244	70.6468
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	66.7774	62.7907	nomascus_leucogenys	ENSNLEP00000036370	78.2101	73.5409
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	67.1096	63.7874	nomascus_leucogenys	ENSNLEP00000030484	80.4781	76.494
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	50.8306	44.8505	panthera_tigris_altaica	ENSPTIP00000018919	70.1835	61.9266
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	60.4651	53.4884	carlito_syrichta	ENSTSYP00000022871	77.7778	68.8034
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	63.4552	57.4751	carlito_syrichta	ENSTSYP00000031117	76.4	69.2
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	47.8405	44.5183	peromyscus_maniculatus_bairdii	ENSPEMP00000030564	66.3594	61.7512
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	52.8239	46.8439	nannospalax_galili	ENSNGAP00000010673	81.1225	71.9388
ENSPCOG00000014063	propithecus_coquereli	ENSPCOP00000006008	55.814	51.1628	cyprinus_carpio_carpio	ENSCCRP00000062998	76.0181	69.6833

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression