RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPCOG00000002064	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	818 bases	Strand	Minus strand
Position	KQ022347.1 : 657872 - 658689	RNA binding domain	Ribosomal_S5_C , Ribosomal_S5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCOP00000000701	Ribosomal_S5_C	PF03719	1.3e-06	1
ENSPCOP00000000701	Ribosomal_S5	PF00333	2.1e-07	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCOT00000002483	753	250aa	ENSPCOP00000000701

Gene Model

Click here to download ENSPCOG00000002064's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCOG00000002064's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000005800	77.2532	70.3863	propithecus_coquereli	ENSPCOP00000000701	72	65.6
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000006008	58.1395	53.8206	propithecus_coquereli	ENSPCOP00000000701	70	64.8

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	46.8	41.6	dasypus_novemcinctus	ENSDNOP00000031417	56.5217	50.2415
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	49.2	42.8	dasypus_novemcinctus	ENSDNOP00000023589	59.1346	51.4423
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	62.4	58.4	callithrix_jacchus	ENSCJAP00000088622	69.6429	65.1786
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	65.2	60.8	callithrix_jacchus	ENSCJAP00000048588	69.3617	64.6809
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	56.8	51.2	callithrix_jacchus	ENSCJAP00000054219	64.5455	58.1818
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	62	56.4	macaca_fascicularis	ENSMFAP00000026315	65.4008	59.4937
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	50.8	44.8	macaca_nemestrina	ENSMNEP00000000679	65.4639	57.732
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	65.6	61.6	papio_anubis	ENSPANP00000029693	69.7872	65.5319
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	74	70	mandrillus_leucophaeus	ENSMLEP00000034950	73.4127	69.4444
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	76.4	71.6	mandrillus_leucophaeus	ENSMLEP00000026703	73.7452	69.112
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	57.2	52	pan_paniscus	ENSPPAP00000035765	58.8477	53.4979
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	70	63.2	pan_troglodytes	ENSPTRP00000064172	71.1382	64.2276
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	58	53.6	pan_troglodytes	ENSPTRP00000074241	67.1296	62.037
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	56.8	52	pongo_abelii	ENSPPYP00000034811	66.0465	60.4651
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	50.8	42.8	mustela_putorius_furo	ENSMPUP00000004632	62.8713	52.9703
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	56	48.4	mustela_putorius_furo	ENSMPUP00000000570	57.8512	50
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	63.2	58	felis_catus	ENSFCAP00000022789	58.9552	54.1045
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	56.4	50	delphinapterus_leucas	ENSDLEP00000025606	62.1145	55.0661
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	57.6	52.4	physeter_catodon	ENSPCTP00005012062	60.7595	55.2743
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	58.8	54.4	balaenoptera_musculus	ENSBMSP00010030142	69.0141	63.8498
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	54.8	48	camelus_dromedarius	ENSCDRP00005030767	59.3074	51.9481
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	72.8	65.6	capra_hircus	ENSCHIP00000008255	61.4865	55.4054
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	56	51.6	ovis_aries_rambouillet	ENSOARP00020000061	62.2222	57.3333
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	64	58.8	dipodomys_ordii	ENSDORP00000019308	72.3982	66.5158
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	64.8	60.4	oryctolagus_cuniculus	ENSOCUP00000023756	74.3119	69.2661
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	51.6	46.8	cricetulus_griseus_chok1gshd	ENSCGRP00001012595	66.1538	60
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	61.6	56.4	mus_spicilegus	ENSMSIP00000029612	66.3793	60.7759
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	60.4	55.6	octodon_degus	ENSODEP00000018414	66.8142	61.5044
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	43.6	40	heterocephalus_glaber_female	ENSHGLP00000010678	65.6627	60.241
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	64	57.6	vombatus_ursinus	ENSVURP00010004747	65.3061	58.7755
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	38.4	32.4	bos_indicus_hybrid	ENSBIXP00005025264	66.6667	56.25
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	68.4	62.4	microcebus_murinus	ENSMICP00000037963	72.1519	65.8228
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	63.2	56.4	otolemur_garnettii	ENSOGAP00000019545	59.3985	53.0075
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	65.2	59.6	phascolarctos_cinereus	ENSPCIP00000003203	72.4444	66.2222
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	72.8	66.8	aotus_nancymaae	ENSANAP00000028810	72.51	66.5339
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	53.2	47.2	aotus_nancymaae	ENSANAP00000027736	66.1692	58.7065
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	50.4	48.4	saimiri_boliviensis_boliviensis	ENSSBOP00000017352	69.6133	66.8508
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	71.2	64.4	monodon_monoceros	ENSMMNP00015008587	66.9173	60.5263
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	70.8	65.2	catagonus_wagneri	ENSCWAP00000015730	76.2931	70.2586
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	62.8	57.6	jaculus_jaculus	ENSJJAP00000020775	70.7207	64.8649
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	68.8	63.2	myotis_lucifugus	ENSMLUP00000020958	72.8814	66.9492
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	76.8	71.2	rhinopithecus_roxellana	ENSRROP00000019171	70.073	64.9635
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	59.6	53.6	rhinopithecus_bieti	ENSRBIP00000028309	69.6262	62.6168
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	69.2	64	rhinopithecus_bieti	ENSRBIP00000009653	72.0833	66.6667
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	69.2	64.4	nomascus_leucogenys	ENSNLEP00000031554	70.6122	65.7143
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	54.8	51.2	carlito_syrichta	ENSTSYP00000018550	64.3193	60.0939
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	55.6	50.8	peromyscus_maniculatus_bairdii	ENSPEMP00000030564	64.0553	58.5253
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	70.8	64.8	nannospalax_galili	ENSNGAP00000006473	66.5414	60.9023
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	62	58	cervus_hanglu_yarkandensis	ENSCHYP00000040880	68.5841	64.1593
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	69.2	62.8	cebus_imitator	ENSCCAP00000020557	74.8918	67.9654
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	59.2	54.4	cebus_imitator	ENSCCAP00000024980	64.0693	58.8745
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	66.8	58.4	bos_mutus	ENSBMUP00000020489	71.0638	62.1277
ENSPCOG00000002064	propithecus_coquereli	ENSPCOP00000000701	60.4	54.4	cyprinus_carpio_carpio	ENSCCRP00000062998	68.3258	61.5385

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression