RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPCLG00000021208	Gene ID		Accession	-
Symbol		Alias	-	Full Name	LSM14A mRNA processing body assembly factor
Status	Confidence	Length	19248 bases	Strand	Plus strand
Position	QCWP01038234.1 : 10216409 - 10235656	RNA binding domain	LSM14 , SM-ATX , FDF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCLP00000024037	LSM14	PF12701	3.7e-32	1
ENSPCLP00000024037	SM-ATX	PF14438	2.5e-08	2
ENSPCLP00000024037	FDF	PF09532	6.6e-31	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCLT00000033394	1386	461aa	ENSPCLP00000024037

Gene Model

Click here to download ENSPCLG00000021208's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCLG00000021208's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCLG00000021208

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCLG00000021208

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression