RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPCLG00000002348	Gene ID		Accession	-
Symbol		Alias	-	Full Name	SAFB like transcription modulator
Status	Confidence	Length	22389 bases	Strand	Plus strand
Position	QCWP01000027.1 : 6112593 - 6134981	RNA binding domain	SAP , RRM_5 , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCLP00000002778	SAP	PF02037	1.9e-10	1
ENSPCLP00000002778	RRM_5	PF13893	4.6e-08	2
ENSPCLP00000002778	RRM_1	PF00076	4.5e-11	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCLT00000003811	3117	1038aa	ENSPCLP00000002778

Gene Model

Click here to download ENSPCLG00000002348's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCLG00000002348's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCLG00000002348

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCLG00000002348

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression