Description

Ensembl ID ENSPCIG00000004699 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 13832 bases Strand Plus strand
Position MSTS01000162.1 : 2706477 - 2720308 RNA binding domain LSM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPCIP00000005632 LSM PF01423 1.5e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPCIT00000007087 1063 313aa ENSPCIP00000005632

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000004277895.850694.1909phascolarctos_cinereusENSPCIP0000000563273.801972.524

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563276.357876.3578sarcophilus_harrisiiENSSHAP0000001195399.583399.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563276.038372.2045choloepus_hoffmanniENSCHOP0000000162889.473784.9624
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.399472.524dasypus_novemcinctusENSDNOP0000002536996.721393.0328
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440971.885erinaceus_europaeusENSEEUP0000000675597.489594.1423
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563258.14755.9105erinaceus_europaeusENSEEUP0000000714396.808593.0851
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.399472.8435callithrix_jacchusENSCJAP0000003903896.721393.4426
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563271.565569.0096callithrix_jacchusENSCJAP0000009111794.514891.1392
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629cercocebus_atysENSCATP0000001721997.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629macaca_fascicularisENSMFAP0000003018697.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524macaca_mulattaENSMMUP0000006689097.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563238.019233.5463macaca_mulattaENSMMUP0000007080471.686763.253
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629macaca_nemestrinaENSMNEP0000001433497.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629papio_anubisENSPANP0000001614097.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629mandrillus_leucophaeusENSMLEP0000002927097.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563252.396247.6038gorilla_gorillaENSGGOP0000003733682.412174.8744
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629gorilla_gorillaENSGGOP0000000391397.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563255.591149.2013pan_paniscusENSPPAP0000002166679.452170.3196
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629pan_paniscusENSPPAP0000000884297.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563255.271649.5208pan_troglodytesENSPTRP0000008424278.995470.7763
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629pan_troglodytesENSPTRP0000006789397.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629pongo_abeliiENSPPYP0000002755697.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524homo_sapiensENSP0000037510597.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563271.565568.6901canis_lupus_familiarisENSCAFP0084502714186.821783.3333
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563238.338735.1438canis_lupus_familiarisENSCAFP0084500847548.192844.1767
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563270.60768.3706vulpes_vulpesENSVVUP0000002452790.573887.7049
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563270.287567.4121ursus_americanusENSUAMP0000002067776.655173.5192
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563244.408939.2971mustela_putorius_furoENSMPUP0000000705867.149859.4203
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045mustela_putorius_furoENSMPUP0000001452997.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045ailuropoda_melanoleucaENSAMEP0000000741497.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563244.408937.3802felis_catusENSFCAP0000004430362.053652.2321
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045felis_catusENSFCAP0000001836697.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563256.549550.7987felis_catusENSFCAP0000003261670.517963.3466
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045panthera_leoENSPLOP0000000476897.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563242.811537.0607panthera_leoENSPLOP0000002714650.950644.1065
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563247.284341.853panthera_pardusENSPPRP0000001388176.288767.5258
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045panthera_pardusENSPPRP0000002797497.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563271.88569.6486delphinapterus_leucasENSDLEP0000001950496.982893.9655
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563277.635873.8019tursiops_truncatusENSTTRP0000001039589.667985.2399
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563265.175761.3419physeter_catodonENSPCTP0000501222991.071485.7143
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.2045physeter_catodonENSPCTP0000501246895.901692.6229
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563215.65512.1406balaenoptera_musculusENSBMSP0001001103377.777860.3175
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563233.865831.9489balaenoptera_musculusENSBMSP0001001222286.178981.3008
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.2045balaenoptera_musculusENSBMSP0001001162195.901692.6229
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.079972.8435loxodonta_africanaENSLAFP0000000793197.916795
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045equus_asinusENSEASP0000502621297.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563247.284340.8946procavia_capensisENSPCAP0000000565960.408252.2449
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045equus_caballusENSECAP0000001587797.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563268.370666.1342sus_scrofaENSSSCP0000002151085.682.8
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563278.594274.1214camelus_dromedariusENSCDRP0000500525282.274277.592
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885bos_taurusENSBTAP0000001085696.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885capra_hircusENSCHIP0000001777496.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885ovis_aries_rambouilletENSOARP0002001022996.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563263.897862.9393oryctolagus_cuniculusENSOCUP0000003229897.56196.0976
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524oryctolagus_cuniculusENSOCUP0000000305997.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524marmota_marmota_marmotaENSMMMP0000002178397.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563252.396250.7987urocitellus_parryiiENSUPAP0001000872770.085567.9487
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524mesocricetus_auratusENSMAUP0000000002997.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524dipodomys_ordiiENSDORP0000000423797.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524mus_caroliMGP_CAROLIEiJ_P007990697.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524mus_musculusENSMUSP0000009600397.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524mus_spretusMGP_SPRETEiJ_P008325297.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524mus_pahariMGP_PahariEiJ_P001676497.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.399472.524cricetulus_griseus_chok1gshdENSCGRP0000100343495.93592.2764
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045mus_spicilegusENSMSIP0000001804197.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524mus_spicilegusENSMSIP0000002228397.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524cavia_porcellusENSCPOP0000001505696.296393.4156
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563257.50854.9521rattus_norvegicusENSRNOP0000008246486.538582.6923
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563259.424954.9521rattus_norvegicusENSRNOP0000008277383.408177.13
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524rattus_norvegicusENSRNOP0000007199497.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563273.482470.9265rattus_norvegicusENSRNOP0000007738495.833392.5
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563264.856261.3419octodon_degusENSODEP0000002184891.441486.4865
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563272.52469.6486octodon_degusENSODEP0000002630795.378291.5966
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524octodon_degusENSODEP0000001829697.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045octodon_degusENSODEP0000002665297.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045ursus_maritimusENSUMAP0000003559197.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563272.843572.8435monodelphis_domesticaENSMODP0000004906283.516583.5165
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563259.744456.5495heterocephalus_glaber_femaleENSHGLP0000000311689.473784.689
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563262.939360.0639heterocephalus_glaber_femaleENSHGLP0000005602083.829880
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524heterocephalus_glaber_femaleENSHGLP0000001666697.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563269.96867.4121heterocephalus_glaber_femaleENSHGLP0000002775892.405189.0295
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563264.217360.3834heterocephalus_glaber_femaleENSHGLP0000005141190.950285.5204
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563215.974414.0575bos_grunniensENSBGRP0000000595076.923167.6923
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885bos_grunniensENSBGRP0000003804596.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563216.293914.0575bos_indicus_hybridENSBIXP0000504096178.461567.6923
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885bos_indicus_hybridENSBIXP0000502281896.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524microcebus_murinusENSMICP0000003766997.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524otolemur_garnettiiENSOGAP0000000661297.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524aotus_nancymaaeENSANAP0000003313587.313484.7015
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524chinchilla_lanigeraENSCLAP0000001654597.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524ictidomys_tridecemlineatusENSSTOP0000000119797.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524catagonus_wagneriENSCWAP0000000889897.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524chlorocebus_sabaeusENSCSAP0000000269997.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.2045phocoena_sinusENSPSNP0000001159295.901692.6229
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563270.287568.0511panthera_tigris_altaicaENSPTIP000000017758885.2
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524nannospalax_galiliENSNGAP0000000022297.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563262.300360.7029nomascus_leucogenysENSNLEP0000000162181.932879.8319
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629rhinopithecus_roxellanaENSRROP0000002259897.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563263.258860.7029peromyscus_maniculatus_bairdiiENSPEMP0000001400689.592885.9728
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563272.52469.6486peromyscus_maniculatus_bairdiiENSPEMP0000002415294.583390.8333
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524peromyscus_maniculatus_bairdiiENSPEMP0000001263397.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563258.14756.5495sorex_araneusENSSARP0000000006776.150674.0586
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563217.571915.9744monodon_monocerosENSMMNP0001500889384.615476.9231
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045monodon_monocerosENSMMNP0001501579995.491892.6229
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524propithecus_coquereliENSPCOP0000000622386.346983.7638
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524sciurus_vulgarisENSSVLP0000501467197.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563244.728441.2141vicugna_pacosENSVPAP0000000786451.851947.7778
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563247.284344.0895pteropus_vampyrusENSPVAP0000000384455.018651.3011
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524microtus_ochrogasterENSMOCP0000001645997.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885cervus_hanglu_yarkandensisENSCHYP0000000821996.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629rhinopithecus_bietiENSRBIP0000003629397.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563261.980857.508rhinolophus_ferrumequinumENSRFEP0001002808262.98758.4416
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563261.341956.23canis_lupus_dingoENSCAFP0002003086571.641865.6716
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.440972.2045neovison_visonENSNVIP0000001977597.083394.1667
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885bos_mutusENSBMUP0000003614296.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885saimiri_boliviensis_boliviensisENSSBOP0000001648696.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718872.8435saimiri_boliviensis_boliviensisENSSBOP0000000009397.131193.4426
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885moschus_moschiferusENSMMSP0000001607096.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563216.613415.016moschus_moschiferusENSMMSP0000000564981.2573.4375
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563275.718873.1629cebus_imitatorENSCCAP0000001291997.131193.8525
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.121471.885bison_bison_bisonENSBBBP0000001166796.666793.75
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524carlito_syrichtaENSTSYP0000000478897.594.5833
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563274.760472.524myotis_lucifugusENSMLUP0000002028495.901693.0328
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563249.520842.8115myotis_lucifugusENSMLUP0000002096976.354766.0098
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563248.881842.1725myotis_lucifugusENSMLUP0000002033275.369565.0246
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563236.421728.115caenorhabditis_elegansW08E3.1.171.2555
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563238.977635.1438ciona_intestinalisENSCINP0000002802373.053965.8683
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563272.843571.5655gadus_morhuaENSGMOP0000004523485.714384.2105
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563244.408941.2141fundulus_heteroclitusENSFHEP0000003269376.795671.2707
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563272.52470.9265cyprinodon_variegatusENSCVAP0000001186194.190992.1162
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563273.162971.5655oryzias_melastigmaENSOMEP0000002248995.416793.3333
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563235.782731.6294ciona_savignyiENSCSAVP0000000280575.167866.443
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563229.39320.1278saccharomyces_cerevisiaeYER029C46.938832.1429
ENSPCIG00000004699phascolarctos_cinereusENSPCIP0000000563273.162971.5655oryzias_javanicusENSOJAP0000004772795.416793.3333

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression