RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSPCEG00000017646	Gene ID		Accession	-
Symbol		Alias	-	Full Name	alanyl-tRNA synthetase 1
Status	Confidence	Length	44548 bases	Strand	Minus strand
Position	ML688537.1 : 482955 - 527502	RNA binding domain	tRNA-synt_2c , tRNA_SAD , DHHA1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCEP00000023231	tRNA-synt_2c	PF01411	5.1e-225	1
ENSPCEP00000023231	tRNA_SAD	PF07973	2.1e-16	2
ENSPCEP00000023231	DHHA1	PF02272	4.2e-17	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCET00000024006	3372	968aa	ENSPCEP00000023231

Gene Model

Click here to download ENSPCEG00000017646's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCEG00000017646's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCEG00000017646

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCEG00000017646

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression