Description

Ensembl ID ENSPCEG00000012408 Gene ID Accession -
Symbol Alias - Full Name SMG6 nonsense mediated mRNA decay factor
Status Confidence Length 113535 bases Strand Plus strand
Position ML686098.1 : 346 - 113880 RNA binding domain EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPCEP00000015714 EST1 PF10374 1.5e-14 1
ENSPCEP00000015714 PIN_4 PF13638 1.6e-20 2
ENSPCEP00000015714 EST1_DNA_bind PF10373 1.8e-58 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPCET00000016269 4400 1414aa ENSPCEP00000015714

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000012408

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000012408

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression