RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPCEG00000008385	Gene ID		Accession	-
Symbol		Alias	-	Full Name	DDB1 and CUL4 associated factor 13
Status	Confidence	Length	46953 bases	Strand	Plus strand
Position	ML685784.1 : 96750 - 143702	RNA binding domain	Sof1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCEP00000010555	Sof1	PF04158	2.3e-36	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCET00000010907	1612	445aa	ENSPCEP00000010555

Gene Model

Click here to download ENSPCEG00000008385's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCEG00000008385's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCEG00000008385

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCEG00000008385

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression