Description

Ensembl ID ENSPCEG00000006970 Gene ID Accession -
Symbol Alias - Full Name SMG7 nonsense mediated mRNA decay factor
Status Confidence Length 84377 bases Strand Plus strand
Position ML685794.1 : 7549235 - 7633611 RNA binding domain EST1 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPCEP00000008733 EST1 PF10374 2.7e-19 1
ENSPCEP00000008733 EST1_DNA_bind PF10373 2.4e-54 2
ENSPCEP00000008670 EST1 PF10374 2.9e-19 1
ENSPCEP00000008670 EST1_DNA_bind PF10373 2.6e-54 2
ENSPCEP00000008692 EST1 PF10374 4.1e-15 1
ENSPCEP00000008692 EST1_DNA_bind PF10373 1.8e-46 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPCET00000008983 5067 1190aa ENSPCEP00000008670
- ENSPCET00000009005 4995 1166aa ENSPCEP00000008692
- ENSPCET00000009045 4917 1140aa ENSPCEP00000008733

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000006970

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000006970

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression