RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSPCEG00000005161	Gene ID		Accession	-
Symbol		Alias	-	Full Name	survival motor neuron domain containing 1
Status	Confidence	Length	12010 bases	Strand	Minus strand
Position	ML685755.1 : 7936752 - 7948761	RNA binding domain	SMN
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPCEP00000006375	SMN	PF06003	3.7e-16	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPCET00000006610	1214	238aa	ENSPCEP00000006375

Gene Model

Click here to download ENSPCEG00000005161's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPCEG00000005161's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCEG00000005161

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPCEG00000005161

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression