Description

Ensembl ID ENSPCEG00000005020 Gene ID Accession -
Symbol Alias - Full Name polypyrimidine tract binding protein 3
Status Confidence Length 126271 bases Strand Minus strand
Position ML685886.1 : 4947143 - 5073413 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPCEP00000007227 RRM_5 PF13893 2.2e-38 1
ENSPCEP00000007227 RRM_5 PF13893 2.2e-38 2
ENSPCEP00000007227 RRM_5 PF13893 2.2e-38 3
ENSPCEP00000007227 RRM_5 PF13893 2.2e-38 4
ENSPCEP00000007227 RRM_8 PF11835 2.2e-14 5
ENSPCEP00000007227 RRM_1 PF00076 1.1e-20 6
ENSPCEP00000007459 RRM_5 PF13893 7.3e-35 1
ENSPCEP00000007459 RRM_5 PF13893 7.3e-35 2
ENSPCEP00000007459 RRM_5 PF13893 7.3e-35 3
ENSPCEP00000007459 RRM_5 PF13893 7.3e-35 4
ENSPCEP00000007459 RRM_8 PF11835 2.2e-14 5
ENSPCEP00000007459 RRM_1 PF00076 9.9e-21 6
ENSPCEP00000007505 RRM_5 PF13893 2.4e-34 1
ENSPCEP00000007505 RRM_5 PF13893 2.4e-34 2
ENSPCEP00000007505 RRM_5 PF13893 2.4e-34 3
ENSPCEP00000007505 RRM_8 PF11835 2.1e-14 4
ENSPCEP00000007505 RRM_1 PF00076 8.8e-21 5
ENSPCEP00000007430 RRM_5 PF13893 2.6e-34 1
ENSPCEP00000007430 RRM_5 PF13893 2.6e-34 2
ENSPCEP00000007430 RRM_5 PF13893 2.6e-34 3
ENSPCEP00000007430 RRM_5 PF13893 2.6e-34 4
ENSPCEP00000007430 RRM_8 PF11835 2.1e-14 5
ENSPCEP00000007430 RRM_1 PF00076 8.1e-21 6
ENSPCEP00000007406 RRM_5 PF13893 3.3e-34 1
ENSPCEP00000007406 RRM_5 PF13893 3.3e-34 2
ENSPCEP00000007406 RRM_5 PF13893 3.3e-34 3
ENSPCEP00000007406 RRM_5 PF13893 3.3e-34 4
ENSPCEP00000007406 RRM_8 PF11835 2.2e-14 5
ENSPCEP00000007406 RRM_1 PF00076 9.2e-21 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPCET00000007486 2031 504aa ENSPCEP00000007227
- ENSPCET00000007670 1509 502aa ENSPCEP00000007406
- ENSPCET00000007698 1479 492aa ENSPCEP00000007430
- ENSPCET00000007727 1527 508aa ENSPCEP00000007459
- ENSPCET00000007773 1500 499aa ENSPCEP00000007505

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000005020

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000005020

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression