Description

Ensembl ID ENSPCEG00000004988 Gene ID Accession -
Symbol Alias - Full Name SMG5 nonsense mediated mRNA decay factor
Status Confidence Length 44457 bases Strand Minus strand
Position ML686014.1 : 124240 - 168696 RNA binding domain EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSPCEP00000006165 EST1 PF10374 1.2e-22 1
ENSPCEP00000006165 PIN_4 PF13638 1.4e-06 2
ENSPCEP00000006165 EST1_DNA_bind PF10373 1.4e-38 3
ENSPCEP00000006165 EST1_DNA_bind PF10373 1.4e-38 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSPCET00000006396 3370 1049aa ENSPCEP00000006165

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000004988

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSPCEG00000004988

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression