RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSPANG00000025252	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4004 bases	Strand	Minus strand
Position	VSMJ01000264.1 : 84199 - 88202	RNA binding domain	Ribosomal_S6e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSPANP00000040415	Ribosomal_S6e	PF01092	1.9e-54	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSPANT00000052480	839	266aa	ENSPANP00000040415

Gene Model

Click here to download ENSPANG00000025252's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSPANG00000025252's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPANG00000025252	papio_anubis	ENSPANP00000019192	100	100	papio_anubis	ENSPANP00000040415	100	100

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	76.6917	76.3158	dasypus_novemcinctus	ENSDNOP00000022591	99.5122	99.0244
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	81.9549	81.9549	macaca_mulatta	ENSMMUP00000017698	100	100
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.1053	91.3534	macaca_nemestrina	ENSMNEP00000005777	98.3936	97.5904
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	78.9474	74.4361	pan_paniscus	ENSPPAP00000009712	88.6076	83.5443
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	96.9925	96.6165	vulpes_vulpes	ENSVVUP00000000916	96.9925	96.6165
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	88.7218	87.9699	ovis_aries_rambouillet	ENSOARP00020018115	99.1597	98.3193
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	81.9549	81.9549	mandrillus_leucophaeus	ENSMLEP00000032168	100	100
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	72.9323	66.1654	canis_lupus_familiaris	ENSCAFP00845027640	71.8519	65.1852
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	89.4737	86.4662	canis_lupus_familiaris	ENSCAFP00845035509	95.5823	92.3695
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	81.203	80.0752	canis_lupus_familiaris	ENSCAFP00845022038	77.6978	76.6187
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	gorilla_gorilla	ENSGGOP00000002614	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	59.3985	54.5113	panthera_leo	ENSPLOP00000010056	79.798	73.2323
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	32.7068	30.8271	panthera_pardus	ENSPPRP00000017155	79.0909	74.5455
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.4812	90.9774	capra_hircus	ENSCHIP00000007760	98.7952	97.1888
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.1053	90.2256	capra_hircus	ENSCHIP00000003989	98.3936	96.3855
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	67.6692	66.5414	cricetulus_griseus_chok1gshd	ENSCGRP00001004627	93.2643	91.7098
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	78.9474	74.812	pan_troglodytes	ENSPTRP00000079023	88.6076	83.9662
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	70.3008	68.797	delphinapterus_leucas	ENSDLEP00000030696	87.3832	85.514
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	28.9474	26.6917	sus_scrofa	ENSSSCP00000077723	84.6154	78.022
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	91.7293	89.8496	octodon_degus	ENSODEP00000026023	97.992	95.9839
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	90.6015	89.0977	octodon_degus	ENSODEP00000026684	96.7871	95.1807
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	31.5789	31.203	phocoena_sinus	ENSPSNP00000005989	83.1683	82.1782
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	mus_caroli	MGP_CAROLIEiJ_P0062879	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	63.5338	60.9023	balaenoptera_musculus	ENSBMSP00010015561	94.4134	90.5028
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.4812	90.9774	saimiri_boliviensis_boliviensis	ENSSBOP00000004262	98.7952	97.1888
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	57.5188	54.8872	chinchilla_lanigera	ENSCLAP00000015065	85.4749	81.5642
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	pongo_abelii	ENSPPYP00000021500	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	71.8045	62.782	loxodonta_africana	ENSLAFP00000028147	81.9743	71.6738
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	90.2256	87.9699	mesocricetus_auratus	ENSMAUP00000017794	95.6175	93.2271
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	mus_pahari	MGP_PahariEiJ_P0078011	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	60.1504	57.8947	phascolarctos_cinereus	ENSPCIP00000011218	81.6327	78.5714
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	90.2256	89.4737	aotus_nancymaae	ENSANAP00000002222	96.3855	95.5823
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	mus_spicilegus	ENSMSIP00000022527	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	88.7218	87.594	rhinopithecus_bieti	ENSRBIP00000026358	98.7448	97.4895
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	99.6241	99.6241	chlorocebus_sabaeus	ENSCSAP00000005654	99.6241	99.6241
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	85.7143	84.2105	microtus_ochrogaster	ENSMOCP00000020095	99.1304	97.3913
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	59.7744	54.1353	ursus_americanus	ENSUAMP00000030313	81.5385	73.8462
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.1053	bison_bison_bison	ENSBBBP00000023238	99.5984	98.3936
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	70.6767	69.5489	carlito_syrichta	ENSTSYP00000023992	97.9167	96.3542
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.1053	90.9774	microcebus_murinus	ENSMICP00000043762	98.3936	97.1888
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	91.7293	90.6015	microcebus_murinus	ENSMICP00000043675	97.992	96.7871
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.4812	91.7293	cebus_imitator	ENSCCAP00000004767	98.7952	97.992
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	61.6541	56.015	tupaia_belangeri	ENSTBEP00000002257	81.592	74.1294
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	89.8496	89.0977	ictidomys_tridecemlineatus	ENSSTOP00000019850	95.9839	95.1807
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	75.9398	74.812	rhinolophus_ferrumequinum	ENSRFEP00010024915	94.8357	93.4272
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	67.6692	65.4135	bos_taurus	ENSBTAP00000064399	91.8367	88.7755
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	cervus_hanglu_yarkandensis	ENSCHYP00000022003	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	63.9098	59.7744	prolemur_simus	ENSPSMP00000014047	84.5771	79.1045
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	marmota_marmota_marmota	ENSMMMP00000007133	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	82.7068	81.5789	oryctolagus_cuniculus	ENSOCUP00000021009	96.9163	95.5947
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	89.4737	86.4662	canis_lupus_dingo	ENSCAFP00020030424	95.5823	92.3695
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	88.3459	85.3383	canis_lupus_dingo	ENSCAFP00020017840	94.3775	91.1647
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	59.0226	52.6316	nannospalax_galili	ENSNGAP00000011698	72.3502	64.5161
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.8571	92.1053	jaculus_jaculus	ENSJJAP00000007472	99.1968	98.3936
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	88.7218	87.9699	ursus_maritimus	ENSUMAP00000023150	99.1597	98.3193
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	42.4812	40.6015	vombatus_ursinus	ENSVURP00010023428	90.4	86.4
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	84.5865	81.203	vombatus_ursinus	ENSVURP00010019441	90.3614	86.747
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	92.8571	92.1053	rhinopithecus_roxellana	ENSRROP00000001400	99.1968	98.3936
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	neovison_vison	ENSNVIP00000016478	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	91.7293	sorex_araneus	ENSSARP00000005933	99.5984	97.992
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	dipodomys_ordii	ENSDORP00000011334	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	81.9549	81.9549	nomascus_leucogenys	ENSNLEP00000021279	100	100
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	66.9173	66.1654	panthera_tigris_altaica	ENSPTIP00000001034	90.8163	89.7959
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.4812	peromyscus_maniculatus_bairdii	ENSPEMP00000022810	99.5984	98.7952
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	81.9549	81.9549	monodon_monoceros	ENSMMNP00015022730	100	100
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	67.6692	67.2932	monodon_monoceros	ENSMMNP00015014469	95.7447	95.2128
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	93.2331	92.1053	moschus_moschiferus	ENSMMSP00000001944	99.5984	98.3936
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	65.4135	59.3985	catagonus_wagneri	ENSCWAP00000009354	87.4372	79.397
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	72.1805	57.5188	caenorhabditis_elegans	Y71A12B.1a.1	78.0488	62.1951
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	80.0752	69.5489	drosophila_melanogaster	FBpp0071087	85.8871	74.5968
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	82.3308	70.3008	ciona_intestinalis	ENSCINP00000003510	88.3064	75.4032
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	79.6992	72.1805	lepisosteus_oculatus	ENSLOCP00000013648	77.3723	70.073
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	45.8647	43.609	carassius_auratus	ENSCARP00000116484	92.4242	87.8788
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	19.1729	16.9173	laticauda_laticaudata	ENSLLTP00000016285	59.3023	52.3256
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	35.3383	33.0827	laticauda_laticaudata	ENSLLTP00000016276	92.1569	86.2745
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	59.3985	46.9925	anas_platyrhynchos_platyrhynchos	ENSAPLP00000018457	32.1138	25.4065
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	83.0827	70.6767	ciona_savignyi	ENSCSAVP00000012874	89.1129	75.8064
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	27.8195	23.6842	podarcis_muralis	ENSPMRP00000005073	74	63
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	16.5414	14.6617	taeniopygia_guttata	ENSTGUP00000021366	61.9718	54.9296
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	68.0451	54.5113	saccharomyces_cerevisiae	YPL090C	76.6949	61.4407
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	68.0451	54.5113	saccharomyces_cerevisiae	YBR181C	76.6949	61.4407
ENSPANG00000025252	papio_anubis	ENSPANP00000040415	33.8346	31.203	sinocyclocheilus_grahami	ENSSGRP00000059789	73.7705	68.0328

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression