| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSOTSG00005030838 | Gene ID |
112250789 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
calreticulin-like |
| Status |
Confidence |
Length |
14881 bases |
Strand |
Plus strand |
| Position |
5 : 54648596 - 54663476 |
RNA binding domain |
Calreticulin |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSOTSP00005064613 |
Calreticulin |
PF00262 |
4.9e-81 |
1 |
| ENSOTSP00005064613 |
Calreticulin |
PF00262 |
4.9e-81 |
2 |
| ENSOTSP00005064582 |
Calreticulin |
PF00262 |
8e-81 |
1 |
| ENSOTSP00005064582 |
Calreticulin |
PF00262 |
8e-81 |
2 |
| ENSOTSP00005064614 |
Calreticulin |
PF00262 |
1.9e-80 |
1 |
| ENSOTSP00005064614 |
Calreticulin |
PF00262 |
1.9e-80 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSOTST00005070180 |
2161 |
461aa |
ENSOTSP00005064582 |
| - |
ENSOTST00005070211 |
1392 |
419aa |
ENSOTSP00005064613 |
| - |
ENSOTST00005070212 |
2343 |
691aa |
ENSOTSP00005064614 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005066610 | 80 | 73.2558 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.7829 | 45.5861 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005037564 | 78.8095 | 69.0476 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.9016 | 41.9682 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005055753 | 74.8201 | 61.3909 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 45.152 | 37.0478 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005059894 | 73.25 | 60 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 42.4023 | 34.7323 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 29.3689 | 17.233 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 17.5109 | 10.275 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005094656 | 35.489 | 24.6057 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 32.5615 | 22.576 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005098061 | 35.6815 | 24.5023 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 33.7192 | 23.1548 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 40.8104 | 32.2721 | caenorhabditis_elegans | Y38A10A.5.1 | 71.3924 | 56.4557 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 45.2967 | 35.4559 | petromyzon_marinus | ENSPMAP00000003021 | 73.3021 | 57.377 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.0333 | 40.0868 | callorhinchus_milii | ENSCMIP00000044200 | 78.3133 | 66.747 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.3227 | 41.9682 | latimeria_chalumnae | ENSLACP00000020782 | 78.6058 | 69.7115 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 48.6252 | 43.7048 | lepisosteus_oculatus | ENSLOCP00000004438 | 78.8732 | 70.892 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.3227 | 40.6657 | clupea_harengus | ENSCHAP00000004633 | 73.9819 | 63.5747 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.6382 | 45.8755 | esox_lucius | ENSELUP00000052987 | 81.6667 | 75.4762 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 50.6512 | 48.6252 | oncorhynchus_kisutch | ENSOKIP00005039023 | 75.9219 | 72.885 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 95.0796 | 94.356 | oncorhynchus_mykiss | ENSOMYP00000013728 | 85.8824 | 85.2288 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 50.7959 | 48.191 | salmo_salar | ENSSSAP00000006579 | 84.375 | 80.0481 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.9016 | 42.547 | gadus_morhua | ENSGMOP00000009312 | 77.6995 | 69.0141 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 89.5803 | 88.4226 | salmo_trutta | ENSSTUP00000069597 | 85.6155 | 84.509 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.4674 | 40.521 | oryzias_latipes | ENSORLP00000003652 | 79.0361 | 67.4699 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.178 | 42.1129 | oreochromis_niloticus | ENSONIP00000009661 | 77.2512 | 68.9573 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.4674 | 41.8234 | haplochromis_burtoni | ENSHBUP00000006235 | 77.7251 | 68.4834 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.178 | 41.3893 | astatotilapia_calliptera | ENSACLP00000028940 | 78.744 | 69.0821 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 48.191 | 41.8234 | sparus_aurata | ENSSAUP00010057278 | 79.0974 | 68.6461 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 50.0724 | 43.9942 | lates_calcarifer | ENSLCAP00010028977 | 80.0926 | 70.3704 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.2041 | 42.1129 | dicentrarchus_labrax | ENSDLAP00005034442 | 79.6253 | 68.1499 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 44.4284 | 39.7974 | erpetoichthys_calabaricus | ENSECRP00000031366 | 77.33 | 69.2695 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.178 | 40.521 | oryzias_melastigma | ENSOMEP00000006838 | 78.744 | 67.6329 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.0333 | 41.6787 | neolamprologus_brichardi | ENSNBRP00000026400 | 77.0142 | 68.2464 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 48.0463 | 42.4023 | seriola_dumerili | ENSSDUP00000026545 | 79.4258 | 70.0957 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 48.7699 | 42.6917 | labrus_bergylta | ENSLBEP00000018871 | 80.0475 | 70.0713 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 50.6512 | 48.0463 | hucho_hucho | ENSHHUP00000044983 | 75.9219 | 72.0174 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 10.7091 | 9.69609 | tetraodon_nigroviridis | ENSTNIP00000017944 | 94.8718 | 85.8974 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.7569 | 42.1129 | mastacembelus_armatus | ENSMAMP00000032993 | 78.0142 | 68.7943 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 24.7467 | 15.1954 | saccharomyces_cerevisiae | YAL058W | 34.0637 | 20.9163 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.9016 | 42.4023 | gasterosteus_aculeatus | ENSGACP00000004023 | 71.645 | 63.4199 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 44.5731 | 38.2055 | cynoglossus_semilaevis | ENSCSEP00000002998 | 78.9744 | 67.6923 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.7569 | 42.547 | betta_splendens | ENSBSLP00000035785 | 40.6905 | 36.2515 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.4935 | 43.5601 | amphiprion_ocellaris | ENSAOCP00000028207 | 80.4706 | 70.8235 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 45.0072 | 40.521 | seriola_lalandi_dorsalis | ENSSLDP00000015730 | 75.4854 | 67.9612 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.4674 | 41.8234 | paramormyrops_kingsleyae | ENSPKIP00000012641 | 79.6116 | 70.1456 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.6122 | 42.4023 | paramormyrops_kingsleyae | ENSPKIP00000028736 | 79.2771 | 70.6024 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 48.6252 | 42.547 | larimichthys_crocea | ENSLCRP00005024311 | 79.4326 | 69.5035 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.6122 | 40.8104 | oryzias_javanicus | ENSOJAP00000023543 | 66.5992 | 57.085 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.0333 | 41.534 | maylandia_zebra | ENSMZEP00005024158 | 78.5024 | 69.3237 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.0593 | 43.8495 | scleropages_formosus | ENSSFOP00015012379 | 73.5358 | 65.7267 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 46.7439 | 41.9682 | scleropages_formosus | ENSSFOP00015046845 | 72.5843 | 65.1685 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 44.7178 | 40.6657 | myripristis_murdjan | ENSMMDP00005042595 | 74.1007 | 67.3861 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 43.8495 | 40.0868 | sander_lucioperca | ENSSLUP00000001873 | 81.6712 | 74.6631 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 47.178 | 41.534 | pundamilia_nyererei | ENSPNYP00000004710 | 78.744 | 69.3237 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 8.9725 | 7.81476 | oryzias_sinensis | ENSOSIP00000026881 | 65.9574 | 57.4468 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 32.2721 | 27.4964 | oryzias_sinensis | ENSOSIP00000036408 | 79.6429 | 67.8571 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.6382 | 43.7048 | acanthochromis_polyacanthus | ENSAPOP00000001968 | 80.5164 | 70.892 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.6382 | 43.7048 | amphiprion_percula | ENSAPEP00000029257 | 80.7059 | 71.0588 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 49.6382 | 43.2706 | stegastes_partitus | ENSSPAP00000014462 | 80.1402 | 69.8598 |
| ENSOTSG00005030838 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 48.0463 | 41.534 | anabas_testudineus | ENSATEP00000009431 | 78.3019 | 67.6887 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
