| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSOTSG00005025241 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
8560 bases |
Strand |
Minus strand |
| Position |
PEKY01001176.1 : 100877 - 109436 |
RNA binding domain |
Calreticulin |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSOTSP00005052116 |
Calreticulin |
PF00262 |
3.5e-56 |
1 |
| ENSOTSP00005052117 |
Calreticulin |
PF00262 |
4.4e-56 |
1 |
| ENSOTSP00005052115 |
Calreticulin |
PF00262 |
4.5e-56 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSOTST00005056749 |
1661 |
388aa |
ENSOTSP00005052115 |
| - |
ENSOTST00005056750 |
1587 |
362aa |
ENSOTSP00005052116 |
| - |
ENSOTST00005056751 |
1683 |
412aa |
ENSOTSP00005052117 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005094656 | 32.9653 | 22.082 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 50.7282 | 33.9806 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005098061 | 32.1593 | 21.7458 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 50.9709 | 34.466 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005055753 | 31.4149 | 17.9856 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 31.7961 | 18.2039 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005059894 | 33.5 | 19.75 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 32.5243 | 19.1748 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005037564 | 31.4286 | 17.8571 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 32.0388 | 18.2039 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005066610 | 29.7674 | 17.4419 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 31.068 | 18.2039 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005064614 | 17.5109 | 10.275 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 29.3689 | 17.233 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 45.6311 | 25.9709 | caenorhabditis_elegans | ZK632.6a.1 | 30.3716 | 17.2859 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 47.0874 | 29.1262 | drosophila_melanogaster | FBpp0084804 | 32.0661 | 19.8347 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 46.6019 | 28.1553 | drosophila_melanogaster | FBpp0073467 | 33.6842 | 20.3509 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 31.7961 | 23.7864 | ciona_intestinalis | ENSCINP00000005300 | 47.6364 | 35.6364 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 52.9126 | 34.7087 | petromyzon_marinus | ENSPMAP00000010752 | 33.7985 | 22.1705 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 44.4175 | 31.068 | eptatretus_burgeri | ENSEBUP00000018222 | 39.9563 | 27.9476 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 51.9417 | 36.6505 | callorhinchus_milii | ENSCMIP00000008673 | 37.2174 | 26.2609 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 58.4951 | 41.9903 | lepisosteus_oculatus | ENSLOCP00000018435 | 44.4649 | 31.9188 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 58.9806 | 46.3592 | clupea_harengus | ENSCHAP00000020105 | 46.0227 | 36.1742 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 58.2524 | 42.7184 | danio_rerio | ENSDARP00000122942 | 53.0973 | 38.9381 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 29.6117 | 23.5437 | carassius_auratus | ENSCARP00000048168 | 54.2222 | 43.1111 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 60.4369 | 45.1456 | astyanax_mexicanus | ENSAMXP00000053806 | 46.7167 | 34.8968 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 57.5243 | 41.7476 | ictalurus_punctatus | ENSIPUP00000021951 | 44.8015 | 32.5142 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 50.9709 | 38.3495 | electrophorus_electricus | ENSEEEP00000047925 | 43.659 | 32.8482 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 72.0874 | 61.8932 | esox_lucius | ENSELUP00000028459 | 70.0472 | 60.1415 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 83.0097 | 80.3398 | oncorhynchus_kisutch | ENSOKIP00005020782 | 81.4286 | 78.8095 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 82.767 | 79.6116 | oncorhynchus_mykiss | ENSOMYP00000136747 | 88.342 | 84.9741 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 82.5243 | 77.9126 | salmo_salar | ENSSSAP00000035725 | 79.8122 | 75.3521 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 44.4175 | 42.7184 | salmo_salar | ENSSSAP00000132656 | 97.3404 | 93.617 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 82.767 | 78.6408 | salmo_trutta | ENSSTUP00000088977 | 84.4059 | 80.198 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 44.9029 | 29.6117 | erpetoichthys_calabaricus | ENSECRP00000017233 | 34.07 | 22.4678 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 59.7087 | 44.9029 | pygocentrus_nattereri | ENSPNAP00000026225 | 48.8095 | 36.7063 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 45.8738 | 32.0388 | ciona_savignyi | ENSCSAVP00000016327 | 40.0424 | 27.9661 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 28.3981 | 15.534 | saccharomyces_cerevisiae | YAL058W | 23.3068 | 12.749 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 58.7379 | 46.1165 | paramormyrops_kingsleyae | ENSPKIP00000005161 | 46.4491 | 36.4683 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 53.1553 | 41.5049 | scleropages_formosus | ENSSFOP00015017609 | 46.2025 | 36.076 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 58.2524 | 45.3883 | denticeps_clupeoides | ENSDCDP00000031182 | 44.4444 | 34.6296 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 53.6408 | 40.0485 | sinocyclocheilus_grahami | ENSSGRP00000045084 | 48.7859 | 36.4238 |
| ENSOTSG00005025241 | oncorhynchus_tshawytscha | ENSOTSP00005052117 | 55.5825 | 40.534 | cyprinus_carpio_carpio | ENSCCRP00000041092 | 53.38 | 38.9277 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
