RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSOTSG00005018530	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1458 bases	Strand	Plus strand
Position	12 : 10363362 - 10364819	RNA binding domain	MRP-S27
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOTSP00005039081	MRP-S27	PF10037	3.2e-29	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOTST00005042520	303	100aa	ENSOTSP00005039081

Gene Model

Click here to download ENSOTSG00005018530's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOTSG00005018530's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOTSG00005018530

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOTSG00005018530	oncorhynchus_tshawytscha	ENSOTSP00005039081	73	61	hippocampus_comes	ENSHCOP00000003029	70.8738	59.2233

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression