RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSOTSG00005017963	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	734 bases	Strand	Plus strand
Position	PEKY01002496.1 : 61913 - 62646	RNA binding domain	IPPT
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOTSP00005038025	IPPT	PF01715	3e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOTST00005041363	222	73aa	ENSOTSP00005038025

Gene Model

Click here to download ENSOTSG00005017963's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOTSG00005017963's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOTSG00005017963

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOTSG00005017963	oncorhynchus_tshawytscha	ENSOTSP00005038025	47.9452	30.137	panthera_leo	ENSPLOP00000003392	39.7727	25
ENSOTSG00005017963	oncorhynchus_tshawytscha	ENSOTSP00005038025	63.0137	46.5753	struthio_camelus_australis	ENSSCUP00000002086	52.8736	39.0805
ENSOTSG00005017963	oncorhynchus_tshawytscha	ENSOTSP00005038025	50.6849	41.0959	sinocyclocheilus_grahami	ENSSGRP00000033502	36.2745	29.4118
ENSOTSG00005017963	oncorhynchus_tshawytscha	ENSOTSP00005038025	50.6849	41.0959	sinocyclocheilus_grahami	ENSSGRP00000055759	36.2745	29.4118

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression