Description

Ensembl ID ENSOTSG00005009164 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 12383 bases Strand Plus strand
Position 13 : 12290274 - 12302656 RNA binding domain R3H , SUZ
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSOTSP00005018753 R3H PF01424 1.4e-11 1
ENSOTSP00005018753 SUZ PF12752 5.8e-10 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSOTST00005020406 3170 684aa ENSOTSP00005018753

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000506094633.833825.1251oncorhynchus_tshawytschaENSOTSP0000501875349.415236.6959
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000503482131.261322.973oncorhynchus_tshawytschaENSOTSP0000501875350.73137.2807
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000502399231.021922.1715oncorhynchus_tshawytschaENSOTSP0000501875349.707635.5263

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875315.05858.18713eptatretus_burgeriENSEBUP0000001971524.879213.5266
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875374.415267.5439esox_luciusENSELUP0000007843775.970168.9552
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875390.935789.7661oncorhynchus_kisutchENSOKIP0000503566395.252794.0276
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875325.73123.2456oncorhynchus_mykissENSOMYP0000008907570.119563.3466
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875386.549785.0877salmo_salarENSSSAP0000012170587.703786.2222
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875349.707648.2456salmo_truttaENSSTUP0000007064083.743881.2808
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875345.760237.5731fundulus_heteroclitusENSFHEP0000000686448.527139.845
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875344.88336.4035xiphophorus_maculatusENSXMAP0000000300247.968838.9062
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875345.61435.3801oryzias_latipesENSORLP0000001454548.826337.8717
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875344.15236.1111cyclopterus_lumpusENSCLMP0000504113147.187538.5938
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875329.678424.7076oreochromis_niloticusENSONIP0000000289256.077346.6851
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875348.830439.3275haplochromis_burtoniENSHBUP0000001656050.453240.6344
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875349.122840.6433sparus_aurataENSSAUP0001000856650.224241.5546
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875335.087730.117lates_calcariferENSLCAP0001001751258.823550.4902
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875350.146241.2281dicentrarchus_labraxENSDLAP0000501734251.734542.5339
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875347.222236.4035cyprinodon_variegatusENSCVAP0000000577550.311538.785
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875334.941528.5088takifugu_rubripesENSTRUP0000003420836.377529.6804
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875345.321635.8187oryzias_melastigmaENSOMEP0000000846947.765837.7504
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875345.321635.8187oryzias_melastigmaENSOMEP0000001470347.839537.8086
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875346.783637.1345kryptolebias_marmoratusENSKMAP0000000534349.155139.0169
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875350.73141.2281seriola_dumeriliENSSDUP0000001261852.02442.2789
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875344.590636.1111poecilia_latipinnaENSPLAP0000002243447.656238.5938
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875344.88336.5497poecilia_formosaENSPFOP0000000805547.968839.0625
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875338.157931.5789scophthalmus_maximusENSSMAP0000001750151.37842.5197
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875346.491237.7193labrus_bergyltaENSLBEP0000000358453.177343.1438
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875347.660839.6199cottoperca_gobioENSCGOP0000003885652.750843.8511
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875386.549785.0877hucho_huchoENSHHUP0000003468490.381788.855
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875332.602326.7544tetraodon_nigroviridisENSTNIP0000002009947.854139.2704
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875350.438640.9357mastacembelus_armatusENSMAMP0000001736452.272742.4242
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875332.894725.5848gasterosteus_aculeatusENSGACP0000000737642.938933.3969
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875342.982533.1871nothobranchius_furzeriENSNFUP0001504568744.61334.4461
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875348.099438.8889betta_splendensENSBSLP0000004217749.848540.303
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875349.26940.7895amphiprion_ocellarisENSAOCP0000000093150.449141.7665
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875337.719331.2866seriola_lalandi_dorsalisENSSLDP0000001262456.331946.7249
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875349.561440.3509larimichthys_croceaENSLCRP0000502513151.131241.629
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875345.175435.6725oryzias_javanicusENSOJAP0000003398147.832837.7709
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875332.309926.1696myripristis_murdjanENSMMDP0000505090150.113440.5896
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875349.415240.9357sander_luciopercaENSSLUP0000005718751.212142.4242
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875345.61435.2339oryzias_sinensisENSOSIP0000002130842.798433.059
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875348.53839.9123acanthochromis_polyacanthusENSAPOP0000001852449.924841.0526
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875349.415240.9357amphiprion_perculaENSAPEP0000002004150.598841.9162
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875348.53840.0585stegastes_partitusENSSPAP0000002229749.626340.9567
ENSOTSG00005009164oncorhynchus_tshawytschaENSOTSP0000501875341.520534.9415anabas_testudineusENSATEP0000002235260.813751.1777

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression