RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSOTSG00005009164 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
12383 bases |
Strand |
Plus strand |
Position |
13 : 12290274 - 12302656 |
RNA binding domain |
R3H , SUZ |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSOTSP00005018753 |
R3H |
PF01424 |
1.4e-11 |
1 |
ENSOTSP00005018753 |
SUZ |
PF12752 |
5.8e-10 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSOTST00005020406 |
3170 |
684aa |
ENSOTSP00005018753 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005060946 | 33.8338 | 25.1251 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.4152 | 36.6959 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005034821 | 31.2613 | 22.973 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 50.731 | 37.2807 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005023992 | 31.0219 | 22.1715 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.7076 | 35.5263 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 15.0585 | 8.18713 | eptatretus_burgeri | ENSEBUP00000019715 | 24.8792 | 13.5266 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 74.4152 | 67.5439 | esox_lucius | ENSELUP00000078437 | 75.9701 | 68.9552 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 90.9357 | 89.7661 | oncorhynchus_kisutch | ENSOKIP00005035663 | 95.2527 | 94.0276 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 25.731 | 23.2456 | oncorhynchus_mykiss | ENSOMYP00000089075 | 70.1195 | 63.3466 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 86.5497 | 85.0877 | salmo_salar | ENSSSAP00000121705 | 87.7037 | 86.2222 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.7076 | 48.2456 | salmo_trutta | ENSSTUP00000070640 | 83.7438 | 81.2808 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 45.7602 | 37.5731 | fundulus_heteroclitus | ENSFHEP00000006864 | 48.5271 | 39.845 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 44.883 | 36.4035 | xiphophorus_maculatus | ENSXMAP00000003002 | 47.9688 | 38.9062 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 45.614 | 35.3801 | oryzias_latipes | ENSORLP00000014545 | 48.8263 | 37.8717 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 44.152 | 36.1111 | cyclopterus_lumpus | ENSCLMP00005041131 | 47.1875 | 38.5938 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 29.6784 | 24.7076 | oreochromis_niloticus | ENSONIP00000002892 | 56.0773 | 46.6851 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 48.8304 | 39.3275 | haplochromis_burtoni | ENSHBUP00000016560 | 50.4532 | 40.6344 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.1228 | 40.6433 | sparus_aurata | ENSSAUP00010008566 | 50.2242 | 41.5546 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 35.0877 | 30.117 | lates_calcarifer | ENSLCAP00010017512 | 58.8235 | 50.4902 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 50.1462 | 41.2281 | dicentrarchus_labrax | ENSDLAP00005017342 | 51.7345 | 42.5339 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 47.2222 | 36.4035 | cyprinodon_variegatus | ENSCVAP00000005775 | 50.3115 | 38.785 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 34.9415 | 28.5088 | takifugu_rubripes | ENSTRUP00000034208 | 36.3775 | 29.6804 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 45.3216 | 35.8187 | oryzias_melastigma | ENSOMEP00000008469 | 47.7658 | 37.7504 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 45.3216 | 35.8187 | oryzias_melastigma | ENSOMEP00000014703 | 47.8395 | 37.8086 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 46.7836 | 37.1345 | kryptolebias_marmoratus | ENSKMAP00000005343 | 49.1551 | 39.0169 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 50.731 | 41.2281 | seriola_dumerili | ENSSDUP00000012618 | 52.024 | 42.2789 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 44.5906 | 36.1111 | poecilia_latipinna | ENSPLAP00000022434 | 47.6562 | 38.5938 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 44.883 | 36.5497 | poecilia_formosa | ENSPFOP00000008055 | 47.9688 | 39.0625 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 38.1579 | 31.5789 | scophthalmus_maximus | ENSSMAP00000017501 | 51.378 | 42.5197 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 46.4912 | 37.7193 | labrus_bergylta | ENSLBEP00000003584 | 53.1773 | 43.1438 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 47.6608 | 39.6199 | cottoperca_gobio | ENSCGOP00000038856 | 52.7508 | 43.8511 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 86.5497 | 85.0877 | hucho_hucho | ENSHHUP00000034684 | 90.3817 | 88.855 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 32.6023 | 26.7544 | tetraodon_nigroviridis | ENSTNIP00000020099 | 47.8541 | 39.2704 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 50.4386 | 40.9357 | mastacembelus_armatus | ENSMAMP00000017364 | 52.2727 | 42.4242 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 32.8947 | 25.5848 | gasterosteus_aculeatus | ENSGACP00000007376 | 42.9389 | 33.3969 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 42.9825 | 33.1871 | nothobranchius_furzeri | ENSNFUP00015045687 | 44.613 | 34.4461 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 48.0994 | 38.8889 | betta_splendens | ENSBSLP00000042177 | 49.8485 | 40.303 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.269 | 40.7895 | amphiprion_ocellaris | ENSAOCP00000000931 | 50.4491 | 41.7665 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 37.7193 | 31.2866 | seriola_lalandi_dorsalis | ENSSLDP00000012624 | 56.3319 | 46.7249 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.5614 | 40.3509 | larimichthys_crocea | ENSLCRP00005025131 | 51.1312 | 41.629 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 45.1754 | 35.6725 | oryzias_javanicus | ENSOJAP00000033981 | 47.8328 | 37.7709 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 32.3099 | 26.1696 | myripristis_murdjan | ENSMMDP00005050901 | 50.1134 | 40.5896 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.4152 | 40.9357 | sander_lucioperca | ENSSLUP00000057187 | 51.2121 | 42.4242 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 45.614 | 35.2339 | oryzias_sinensis | ENSOSIP00000021308 | 42.7984 | 33.059 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 48.538 | 39.9123 | acanthochromis_polyacanthus | ENSAPOP00000018524 | 49.9248 | 41.0526 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 49.4152 | 40.9357 | amphiprion_percula | ENSAPEP00000020041 | 50.5988 | 41.9162 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 48.538 | 40.0585 | stegastes_partitus | ENSSPAP00000022297 | 49.6263 | 40.9567 |
ENSOTSG00005009164 | oncorhynchus_tshawytscha | ENSOTSP00005018753 | 41.5205 | 34.9415 | anabas_testudineus | ENSATEP00000022352 | 60.8137 | 51.1777 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |