| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSOTSG00005007400 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
4154 bases |
Strand |
Plus strand |
| Position |
28 : 28461547 - 28465700 |
RNA binding domain |
Calreticulin |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSOTSP00005014701 |
Calreticulin |
PF00262 |
3.7e-80 |
1 |
| ENSOTSP00005014701 |
Calreticulin |
PF00262 |
3.7e-80 |
2 |
| ENSOTSP00005014702 |
Calreticulin |
PF00262 |
3.9e-64 |
1 |
| ENSOTSP00005014702 |
Calreticulin |
PF00262 |
3.9e-64 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSOTST00005016066 |
2263 |
420aa |
ENSOTSP00005014701 |
| - |
ENSOTST00005016067 |
2245 |
410aa |
ENSOTSP00005014702 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOTSG00005007400 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 72.1429 | 58.0952 | drosophila_melanogaster | FBpp0306685 | 74.6305 | 60.0985 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 77.381 | 65.4762 | eptatretus_burgeri | ENSEBUP00000013566 | 75.7576 | 64.1026 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 81.9048 | 70.2381 | danio_rerio | ENSDARP00000130666 | 82.2967 | 70.5742 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 80.9524 | 69.0476 | carassius_auratus | ENSCARP00000098139 | 81.3397 | 69.378 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 80.4762 | 68.8095 | carassius_auratus | ENSCARP00000100937 | 64.0152 | 54.7348 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 86.6667 | 76.4286 | astyanax_mexicanus | ENSAMXP00000019127 | 86.052 | 75.8865 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 87.619 | 75.4762 | esox_lucius | ENSELUP00000007513 | 87.619 | 75.4762 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 99.0476 | 98.5714 | oncorhynchus_kisutch | ENSOKIP00005111820 | 98.5782 | 98.1043 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 95.7143 | 93.5714 | salmo_salar | ENSSSAP00000046920 | 96.6346 | 94.4712 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 81.6667 | 69.2857 | fundulus_heteroclitus | ENSFHEP00000003804 | 81.2796 | 68.9573 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 77.1429 | 65 | oryzias_latipes | ENSORLP00000021484 | 86.8633 | 73.1903 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 80.7143 | 65.7143 | cyclopterus_lumpus | ENSCLMP00005000931 | 71.9745 | 58.5987 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 82.619 | 69.5238 | xenopus_tropicalis | ENSXETP00000017402 | 83.4135 | 70.1923 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 81.9048 | 70.7143 | chrysemys_picta_bellii | ENSCPBP00000034267 | 73.8197 | 63.7339 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 85 | 71.9048 | ailuropoda_melanoleuca | ENSAMEP00000027580 | 85.8173 | 72.5962 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 81.4286 | 68.0952 | equus_caballus | ENSECAP00000059084 | 83.0097 | 69.4175 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 79.7619 | 69.5238 | pelodiscus_sinensis | ENSPSIP00000014509 | 85.4592 | 74.4898 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 86.6667 | 74.0476 | takifugu_rubripes | ENSTRUP00000056545 | 84.2593 | 71.9907 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 87.381 | 75 | oryzias_melastigma | ENSOMEP00000027753 | 86.3529 | 74.1176 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 9.28571 | 3.57143 | neolamprologus_brichardi | ENSNBRP00000012285 | 54.1667 | 20.8333 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 83.8095 | 71.4286 | naja_naja | ENSNNAP00000017996 | 84.6154 | 72.1154 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 88.3333 | 74.7619 | pygocentrus_nattereri | ENSPNAP00000030202 | 88.1235 | 74.5843 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 82.1429 | 67.619 | scophthalmus_maximus | ENSSMAP00000008207 | 70.4082 | 57.9592 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 83.0952 | 69.2857 | myotis_lucifugus | ENSMLUP00000011626 | 83.8942 | 69.9519 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 76.9048 | 63.0952 | cottoperca_gobio | ENSCGOP00000056027 | 76.1792 | 62.5 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 88.3333 | 75.9524 | mastacembelus_armatus | ENSMAMP00000005512 | 86.0789 | 74.0139 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 87.1429 | 74.7619 | larimichthys_crocea | ENSLCRP00005030029 | 85.514 | 73.3645 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 56.9048 | 48.0952 | larimichthys_crocea | ENSLCRP00005003917 | 87.2263 | 73.7226 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 87.8571 | 77.1429 | myripristis_murdjan | ENSMMDP00005003848 | 86.4169 | 75.8782 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 87.619 | 77.1429 | sinocyclocheilus_grahami | ENSSGRP00000014903 | 86.7924 | 76.4151 |
| ENSOTSG00005007400 | oncorhynchus_tshawytscha | ENSOTSP00005014701 | 82.381 | 69.5238 | cyprinus_carpio_carpio | ENSCCRP00000001961 | 81.9905 | 69.1943 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
