Description

Ensembl ID ENSOTSG00005002904 Gene ID Accession -
Symbol Alias - Full Name small nuclear ribonucleoprotein polypeptide F
Status Confidence Length 10727 bases Strand Plus strand
Position 15 : 4053250 - 4063976 RNA binding domain LSM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSOTSP00005005044 LSM PF01423 6.2e-20 1
ENSOTSP00005005037 LSM PF01423 6.3e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSOTST00005005615 1022 97aa ENSOTSP00005005037
- ENSOTST00005005622 2827 89aa ENSOTSP00005005044

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000502133576.666775oncorhynchus_tshawytschaENSOTSP0000500503747.422746.3918

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503797.938197.9381oncorhynchus_kisutchENSOKIP0000505316297.938197.9381
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503787.628986.5979salmo_salarENSSSAP000001219378584
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503746.391843.299haplochromis_burtoniENSHBUP000000258897570
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503745.360843.299chrysemys_picta_belliiENSCPBP0000000242084.615480.7692
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503745.360843.299crocodylus_porosusENSCPRP000050275788076.3636
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503759.793850.5155cercocebus_atysENSCATP0000000063446.031738.8889
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503759.793850.5155papio_anubisENSPANP0000003529945.669338.5827
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503759.793850.5155mandrillus_leucophaeusENSMLEP0000001870745.669338.5827
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503759.793850.5155macaca_nemestrinaENSMNEP0000001297345.669338.5827
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503761.855751.5464pan_paniscusENSPPAP0000000081847.244139.3701
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503751.546436.0825vulpes_vulpesENSVVUP0000000401666.666746.6667
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503761.855751.5464pan_troglodytesENSPTRP0000000903647.244139.3701
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503749.484535.0515canis_lupus_familiarisENSCAFP0084502117639.024427.6423
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503751.546445.3608capra_hircusENSCHIP0000001717873.529464.7059
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503741.237128.866monodelphis_domesticaENSMODP0000004264058.823541.1765
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503747.422746.3918bos_grunniensENSBGRP0000001118354.761953.5714
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503746.391843.299otolemur_garnettiiENSOGAP0000001283284.905779.2453
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503738.144330.9278takifugu_rubripesENSTRUP0000003822850.684941.0959
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503745.360838.1443phascolarctos_cinereusENSPCIP0000002267162.857152.8571
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503743.29943.299poecilia_formosaENSPFOP0000002100591.304391.3043
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503741.237130.9278sciurus_vulgarisENSSVLP0000503137061.538546.1538
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503760.824750.5155rhinopithecus_roxellanaENSRROP0000001364946.456738.5827
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503759.793850.5155rhinopithecus_bietiENSRBIP0000000987345.669338.5827
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503744.329938.1443podarcis_muralisENSPMRP0000002390178.181867.2727
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503773.195973.1959hucho_huchoENSHHUP0000005376174.736874.7368
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503762.886653.6082nomascus_leucogenysENSNLEP0000003519748.412741.2698
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503744.329932.9897canis_lupus_dingoENSCAFP0002001819037.391327.8261
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503745.360844.3299chelonoidis_abingdoniiENSCABP0000002814474.576372.8814
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503749.484546.3918gopherus_evgoodeiENSGEVP0000500211947.524844.5545
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503742.26840.2062hippocampus_comesENSHCOP0000002259663.076960
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503751.546445.3608oryzias_sinensisENSOSIP0000003004458.823551.7647
ENSOTSG00005002904oncorhynchus_tshawytschaENSOTSP0000500503743.29936.0825peromyscus_maniculatus_bairdiiENSPEMP0000002754664.615453.8462

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression