RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSOSIG00000006243	Gene ID		Accession	-
Symbol	si	Alias	-	Full Name	si:dkey-86e18.1
Status	Confidence	Length	100094 bases	Strand	Plus strand
Position	VHIC01002233.1 : 1415896 - 1515989	RNA binding domain	Isy1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOSIP00000010002	Isy1	PF06246	3.7e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
si:dkey-86e18.1-201	ENSOSIT00000010640	2416	306aa	ENSOSIP00000010002

Gene Model

Click here to download ENSOSIG00000006243's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOSIG00000006243's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOSIG00000006243

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	66.3399	57.5163	fundulus_heteroclitus	ENSFHEP00000000223	65.9091	57.1429
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	61.1111	52.2876	poecilia_reticulata	ENSPREP00000002880	58.9905	50.4732
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	95.4248	94.7712	oryzias_latipes	ENSORLP00000026499	95.4248	94.7712
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	68.9542	57.5163	xiphophorus_maculatus	ENSXMAP00000011423	69.4079	57.8947
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	43.7908	35.2941	cyclopterus_lumpus	ENSCLMP00005026862	62.3256	50.2326
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	50.6536	41.5033	cyclopterus_lumpus	ENSCLMP00005026866	67.0996	54.9784
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	62.7451	51.3072	oreochromis_niloticus	ENSONIP00000040749	67.8445	55.477
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	64.0523	51.634	astatotilapia_calliptera	ENSACLP00000017991	68.5315	55.2448
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	60.7843	49.3464	sparus_aurata	ENSSAUP00010020899	63.0508	51.1864
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	63.7255	51.634	haplochromis_burtoni	ENSHBUP00000016294	68.1818	55.2448
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	62.0915	48.0392	cyprinodon_variegatus	ENSCVAP00000031087	53.9773	41.7614
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	65.3595	53.9216	dicentrarchus_labrax	ENSDLAP00005004196	57.1429	47.1429
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	61.7647	52.2876	lates_calcarifer	ENSLCAP00010017655	75.2988	63.745
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	55.5556	46.0784	takifugu_rubripes	ENSTRUP00000058398	61.5942	51.087
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	66.6667	56.2092	kryptolebias_marmoratus	ENSKMAP00000011161	66.4495	56.0261
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	57.1895	47.3856	neolamprologus_brichardi	ENSNBRP00000031082	70.2811	58.2329
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	69.9346	59.8039	poecilia_formosa	ENSPFOP00000014508	70.3947	60.1974
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	83.9869	78.1046	oryzias_melastigma	ENSOMEP00000000888	84.8185	78.8779
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	63.0719	50.3268	scophthalmus_maximus	ENSSMAP00000028848	61.859	49.359
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	69.9346	59.8039	poecilia_latipinna	ENSPLAP00000007541	70.3947	60.1974
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	64.7059	53.9216	cottoperca_gobio	ENSCGOP00000003309	62.6582	52.2152
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	58.4967	50	amphilophus_citrinellus	ENSACIP00000010036	71.6	61.2
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	62.4183	51.3072	anabas_testudineus	ENSATEP00000026044	64.3098	52.862
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	67.3203	54.902	seriola_dumerili	ENSSDUP00000000995	64.7799	52.8302
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	59.8039	43.4641	labrus_bergylta	ENSLBEP00000010421	66.065	48.0144
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	63.7255	52.2876	nothobranchius_furzeri	ENSNFUP00015040707	64.3564	52.8053
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	58.8235	50	amphiprion_ocellaris	ENSAOCP00000010212	72.5806	61.6936
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	51.634	42.1569	hippocampus_comes	ENSHCOP00000014560	59.6226	48.6792
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	64.0523	51.634	maylandia_zebra	ENSMZEP00005026075	68.5315	55.2448
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	65.6863	55.8824	acanthochromis_polyacanthus	ENSAPOP00000001501	63.8095	54.2857
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	83.9869	79.7386	oryzias_javanicus	ENSOJAP00000008950	84.5395	80.2632
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	68.6274	57.5163	stegastes_partitus	ENSSPAP00000019487	68.1818	57.1429
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	64.0523	51.3072	pundamilia_nyererei	ENSPNYP00000009840	68.5315	54.8951
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	67.3203	54.2484	seriola_lalandi_dorsalis	ENSSLDP00000000253	64.5768	52.0376
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	56.8627	47.0588	betta_splendens	ENSBSLP00000020917	53.87	44.582
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	64.7059	52.9412	larimichthys_crocea	ENSLCRP00005048956	60.7362	49.6933
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	62.7451	51.9608	sander_lucioperca	ENSSLUP00000051989	62.9508	52.1311
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	66.0131	53.5948	mastacembelus_armatus	ENSMAMP00000063006	64.127	52.0635
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	56.5359	43.1373	cynoglossus_semilaevis	ENSCSEP00000011614	59.8616	45.6747
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	63.7255	53.268	amphiprion_percula	ENSAPEP00000016554	64.1447	53.6184
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	34.6405	23.2026	callorhinchus_milii	ENSCMIP00000047508	50.237	33.6493
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	45.4248	31.3725	latimeria_chalumnae	ENSLACP00000004415	50.5455	34.9091
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	50.6536	37.5817	lepisosteus_oculatus	ENSLOCP00000010842	59.387	44.0613
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	50.6536	39.5425	danio_rerio	ENSDARP00000063916	60.5469	47.2656
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	49.0196	37.9085	carassius_auratus	ENSCARP00000109213	55.9701	43.2836
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	48.6928	35.2941	astyanax_mexicanus	ENSAMXP00000038881	51.7361	37.5
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	51.3072	38.5621	ictalurus_punctatus	ENSIPUP00000018012	60.3846	45.3846
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	52.9412	41.1765	esox_lucius	ENSELUP00000006344	54.3624	42.2819
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	56.2092	45.4248	oncorhynchus_kisutch	ENSOKIP00005032665	48.0447	38.8268
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	52.6144	43.1373	oncorhynchus_mykiss	ENSOMYP00000069877	65.7143	53.8776
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	55.5556	44.4444	salmo_salar	ENSSSAP00000056768	58.0205	46.4164
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	56.2092	45.4248	salmo_trutta	ENSSTUP00000005012	58.7031	47.4403
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	44.4444	35.9477	gadus_morhua	ENSGMOP00000022898	64.1509	51.8868
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	45.098	34.3137	erpetoichthys_calabaricus	ENSECRP00000025919	48.9362	37.234
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	51.634	39.8693	pygocentrus_nattereri	ENSPNAP00000023490	61.2403	47.2868
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	55.5556	45.098	hucho_hucho	ENSHHUP00000054092	57.4324	46.6216
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	41.1765	31.3725	sinocyclocheilus_grahami	ENSSGRP00000006548	56.5022	43.0493
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	50	38.2353	sinocyclocheilus_grahami	ENSSGRP00000069853	57.0896	43.6567
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	55.8824	45.4248	oncorhynchus_tshawytscha	ENSOTSP00005079409	58.3618	47.4403
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	50.3268	35.9477	scleropages_formosus	ENSSFOP00015041684	56	40
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	50.3268	35.9477	scleropages_formosus	ENSSFOP00015050610	56	40
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	64.0523	51.3072	myripristis_murdjan	ENSMMDP00005029580	55.3672	44.3503
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	43.4641	35.2941	paramormyrops_kingsleyae	ENSPKIP00000027532	56.3559	45.7627
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	48.0392	33.3333	leptobrachium_leishanense	ENSLLEP00000045358	56.9767	39.5349
ENSOSIG00000006243	oryzias_sinensis	ENSOSIP00000010002	49.3464	37.9085	cyprinus_carpio_carpio	ENSCCRP00000103366	56.5543	43.4457

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression