RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSORLG00020008009	Gene ID		Accession	-
Symbol		Alias	-	Full Name	CCR4-NOT transcription complex, subunit 3a
Status	Confidence	Length	11996 bases	Strand	Plus strand
Position	16 : 18477873 - 18489868	RNA binding domain	Not3 , NOT2_3_5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSORLP00020007119	Not3	PF04065	2.2e-96	1
ENSORLP00020007119	NOT2_3_5	PF04153	9.6e-38	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSORLT00020003430	5772	902aa	ENSORLP00020007119

Gene Model

Click here to download ENSORLG00020008009's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSORLG00020008009's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00020008009

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00020008009

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression