RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSORLG00020007407	Gene ID	101164511	Accession	-
Symbol	phf5a	Alias	-	Full Name	PHD finger protein 5A
Status	Confidence	Length	2568 bases	Strand	Minus strand
Position	19 : 1770726 - 1773293	RNA binding domain	PHF5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSORLP00020025464	PHF5	PF03660	1.5e-48	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
phf5a-201	ENSORLT00020004369	894	110aa	ENSORLP00020025464

Gene Model

Click here to download ENSORLG00020007407's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSORLG00020007407's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00020007407

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00020007407

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression