Description

Ensembl ID ENSORLG00020005559 Gene ID Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 20820 bases Strand Minus strand
Position 17 : 17247090 - 17267909 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSORLP00020004588 SH3_12 PF18129 7.2e-17 1
ENSORLP00020004588 XRN_N PF03159 1.9e-94 2
ENSORLP00020004588 XRN1_D1 PF18332 1e-28 3
ENSORLP00020024193 SH3_12 PF18129 7.5e-17 1
ENSORLP00020024193 XRN_N PF03159 1.9e-94 2
ENSORLP00020024193 XRN1_D1 PF18332 1.8e-28 3
ENSORLP00020004695 SH3_12 PF18129 7.6e-17 1
ENSORLP00020004695 XRN_N PF03159 2e-94 2
ENSORLP00020004695 XRN1_D1 PF18332 1.9e-28 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSORLT00020007538 5382 1704aa ENSORLP00020004695
- ENSORLT00020007594 5337 1689aa ENSORLP00020024193
- ENSORLT00020007708 4899 1632aa ENSORLP00020004588

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSORLG00020005559

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSORLG00020005559

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression