Description

Ensembl ID ENSORLG00020004812 Gene ID Accession -
Symbol blm Alias - Full Name Oryzias latipes BLM RecQ like helicase (blm), mRNA.
Status Confidence Length 9761 bases Strand Minus strand
Position 6 : 15481733 - 15491493 RNA binding domain BDHCT , DEAD , HRDC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSORLP00020023726 BDHCT PF08072 3.4e-20 1
ENSORLP00020023726 DEAD PF00270 3.2e-17 2
ENSORLP00020023726 HRDC PF00570 6.9e-14 3
ENSORLP00020003904 BDHCT PF08072 3.4e-20 1
ENSORLP00020003904 HRDC PF00570 6.8e-14 2
ENSORLP00020023710 BDHCT PF08072 3.5e-20 1
ENSORLP00020023710 DEAD PF00270 3.3e-17 2
ENSORLP00020023710 HRDC PF00570 7.1e-14 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
blm-201 ENSORLT00020008776 4510 1363aa ENSORLP00020023726
blm-202 ENSORLT00020008823 4542 1393aa ENSORLP00020023710
blm-203 ENSORLT00020008862 4074 1357aa ENSORLP00020003904

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSORLG00020004812

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSORLG00020004812

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression