RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSORLG00015011995	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Oryzias latipes serine/threonine-protein kinase/endoribonuclease IRE1-like (LOC101162428), mRNA.
Status	Confidence	Length	8168 bases	Strand	Plus strand
Position	1 : 21526902 - 21535069	RNA binding domain	Ribonuc_2-5A
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSORLP00015011087	Ribonuc_2-5A	PF06479	2.5e-40	1
ENSORLP00015011105	Ribonuc_2-5A	PF06479	2.7e-40	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSORLT00015032079	2892	963aa	ENSORLP00015011105
-	ENSORLT00015017842	2766	921aa	ENSORLP00015011087

Gene Model

Click here to download ENSORLG00015011995's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSORLG00015011995's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00015011995

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00015011995

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression