RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSORLG00015005712	Gene ID	101158983	Accession	-
Symbol		Alias	-	Full Name	symplekin
Status	Confidence	Length	11149 bases	Strand	Minus strand
Position	21 : 17610302 - 17621450	RNA binding domain	Symplekin_C , SYMPK_PTA1_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSORLP00015024898	Symplekin_C	PF12295	1.3e-73	1
ENSORLP00015024898	SYMPK_PTA1_N	PF11935	9e-55	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSORLT00015006762	4469	1212aa	ENSORLP00015024898

Gene Model

Click here to download ENSORLG00015005712's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSORLG00015005712's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00015005712

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00015005712

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression