RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSORLG00015003004	Gene ID		Accession	-
Symbol		Alias	-	Full Name	DEAD (Asp-Glu-Ala-Asp) box helicase 56
Status	Confidence	Length	8343 bases	Strand	Minus strand
Position	12 : 2162327 - 2170669	RNA binding domain	ResIII , DEAD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSORLP00015002339	ResIII	PF04851	2.6e-08	1
ENSORLP00015002339	DEAD	PF00270	7.4e-38	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSORLT00015011136	2565	582aa	ENSORLP00015002339

Gene Model

Click here to download ENSORLG00015003004's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSORLG00015003004's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00015003004

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00015003004

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression