| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSORLG00000016590 | Gene ID |
101168217 |
Accession |
- |
| Symbol |
zgc |
Alias |
- |
Full Name |
tetratricopeptide repeat protein 39A |
| Status |
Confidence |
Length |
16836 bases |
Strand |
Plus strand |
| Position |
8 : 22698456 - 22715291 |
RNA binding domain |
Iml2-TPR_39 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSORLP00000028138 |
Iml2-TPR_39 |
PF10300 |
2.5e-162 |
1 |
| ENSORLP00000020770 |
Iml2-TPR_39 |
PF10300 |
8.9e-145 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| zgc:158403-201 |
ENSORLT00000033477 |
4332 |
563aa |
ENSORLP00000028138 |
| zgc:158403-202 |
ENSORLT00000020771 |
1575 |
524aa |
ENSORLP00000020770 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000040123 | 62.7837 | 50.8321 | oryzias_latipes | ENSORLP00000028138 | 73.7123 | 59.6803 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000042305 | 68.8645 | 50.9158 | oryzias_latipes | ENSORLP00000028138 | 66.7851 | 49.3783 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000034761 | 65 | 47.4138 | oryzias_latipes | ENSORLP00000028138 | 66.9627 | 48.8455 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000021155 | 41.6031 | 21.374 | oryzias_latipes | ENSORLP00000028138 | 19.3606 | 9.94671 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000027875 | 44.8696 | 24.6957 | oryzias_latipes | ENSORLP00000028138 | 45.8259 | 25.222 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000044001 | 45.1389 | 24.3056 | oryzias_latipes | ENSORLP00000028138 | 11.5453 | 6.2167 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 64.8313 | 55.7726 | fundulus_heteroclitus | ENSFHEP00000019275 | 75.1029 | 64.6091 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 92.54 | 82.9485 | xiphophorus_maculatus | ENSXMAP00000014141 | 92.54 | 82.9485 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 93.6057 | 84.1918 | seriola_dumerili | ENSSDUP00000011188 | 93.7722 | 84.3416 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 78.6856 | 69.627 | cyclopterus_lumpus | ENSCLMP00005028509 | 76.3793 | 67.5862 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 92.7176 | 83.8366 | poecilia_formosa | ENSPFOP00000000794 | 92.7176 | 83.8366 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.2771 | 79.5737 | acanthochromis_polyacanthus | ENSAPOP00000027463 | 92.3792 | 83.2714 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.8099 | 78.8632 | takifugu_rubripes | ENSTRUP00000035281 | 84.8896 | 75.382 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 90.7638 | 80.4618 | labrus_bergylta | ENSLBEP00000008632 | 90.7638 | 80.4618 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 93.2504 | 84.3694 | amphiprion_ocellaris | ENSAOCP00000007602 | 93.0851 | 84.2199 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 75.6661 | 68.9165 | neolamprologus_brichardi | ENSNBRP00000016143 | 84.6918 | 77.1372 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 93.4281 | 84.7247 | haplochromis_burtoni | ENSHBUP00000031139 | 93.0973 | 84.4248 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 83.4813 | 74.4227 | lates_calcarifer | ENSLCAP00010034743 | 80.3419 | 71.6239 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 92.1847 | 82.0604 | nothobranchius_furzeri | ENSNFUP00015005584 | 92.1847 | 82.0604 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 86.3233 | 77.087 | tetraodon_nigroviridis | ENSTNIP00000003541 | 87.8843 | 78.481 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 72.6465 | 70.1599 | oryzias_javanicus | ENSOJAP00000047981 | 91.0913 | 87.9733 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.968 | 77.2647 | sparus_aurata | ENSSAUP00010056039 | 80.6667 | 72.5 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 93.4281 | 84.5471 | amphiprion_percula | ENSAPEP00000025552 | 93.2624 | 84.3972 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 89.5204 | 81.5275 | cyprinodon_variegatus | ENSCVAP00000030470 | 93.8548 | 85.4749 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.968 | 78.1528 | maylandia_zebra | ENSMZEP00005030884 | 84.0278 | 76.3889 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 99.4671 | 98.9343 | oryzias_sinensis | ENSOSIP00000033679 | 95.5631 | 95.0512 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 92.54 | 83.3037 | sander_lucioperca | ENSSLUP00000012454 | 92.3759 | 83.156 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 97.6909 | 95.5595 | oryzias_melastigma | ENSOMEP00000009311 | 90.4605 | 88.4868 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.968 | 77.2647 | oreochromis_niloticus | ENSONIP00000040640 | 80.5324 | 72.3794 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.8099 | 79.929 | amphilophus_citrinellus | ENSACIP00000014877 | 92.2509 | 83.0258 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 90.9414 | 82.0604 | larimichthys_crocea | ENSLCRP00005031233 | 84.0723 | 75.8621 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 93.4281 | 84.1918 | seriola_lalandi_dorsalis | ENSSLDP00000021152 | 93.5943 | 84.3416 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 83.8366 | 75.8437 | pundamilia_nyererei | ENSPNYP00000019943 | 85.8182 | 77.6364 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 93.2504 | 83.659 | mastacembelus_armatus | ENSMAMP00000050170 | 93.0851 | 83.5106 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.6323 | 80.1066 | poecilia_latipinna | ENSPLAP00000021511 | 87.0855 | 78.7085 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 93.2504 | 84.7247 | astatotilapia_calliptera | ENSACLP00000012695 | 92.9204 | 84.4248 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 92.7176 | 82.5933 | betta_splendens | ENSBSLP00000009419 | 92.3894 | 82.3009 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 87.0337 | 79.0409 | stegastes_partitus | ENSSPAP00000015062 | 91.7603 | 83.3333 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 77.6199 | 68.0284 | poecilia_reticulata | ENSPREP00000019420 | 85.0195 | 74.5136 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.968 | 77.4423 | anabas_testudineus | ENSATEP00000049628 | 84.3206 | 75.9582 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 86.8561 | 78.3304 | gasterosteus_aculeatus | ENSGACP00000006671 | 85.9402 | 77.5044 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.6128 | 76.5542 | scophthalmus_maximus | ENSSMAP00000003046 | 82.2526 | 73.5495 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 83.1261 | 74.2451 | cottoperca_gobio | ENSCGOP00000014005 | 80.4124 | 71.8213 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 89.698 | 78.508 | hippocampus_comes | ENSHCOP00000016091 | 89.539 | 78.3688 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 80.9947 | 73.0018 | cynoglossus_semilaevis | ENSCSEP00000020002 | 87.1893 | 78.5851 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 80.9947 | 71.5808 | dicentrarchus_labrax | ENSDLAP00005037718 | 79.5812 | 70.3316 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 92.0071 | 84.1918 | kryptolebias_marmoratus | ENSKMAP00000012472 | 91.844 | 84.0426 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 51.5098 | 33.5702 | caenorhabditis_elegans | C32D5.6.1 | 50.173 | 32.699 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 52.5755 | 36.0568 | ciona_intestinalis | ENSCINP00000012827 | 54.1133 | 37.1115 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 46.1812 | 32.8597 | eptatretus_burgeri | ENSEBUP00000008806 | 66.4962 | 47.3146 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 58.6146 | 47.2469 | latimeria_chalumnae | ENSLACP00000017344 | 77.4648 | 62.4413 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 87.2114 | 73.8899 | lepisosteus_oculatus | ENSLOCP00000009773 | 83.3616 | 70.6282 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 82.238 | 71.048 | clupea_harengus | ENSCHAP00000011108 | 79.8276 | 68.9655 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 87.389 | 75.1332 | danio_rerio | ENSDARP00000085503 | 87.0796 | 74.8673 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 86.5009 | 74.4227 | carassius_auratus | ENSCARP00000123537 | 72.5782 | 62.4441 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 86.5009 | 73.5346 | carassius_auratus | ENSCARP00000048893 | 86.1947 | 73.2743 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 79.929 | 69.4494 | astyanax_mexicanus | ENSAMXP00000044967 | 84.4278 | 73.3584 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 87.7442 | 75.3108 | ictalurus_punctatus | ENSIPUP00000009968 | 87.4336 | 75.0443 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 87.5666 | 75.3108 | electrophorus_electricus | ENSEEEP00000038983 | 88.0357 | 75.7143 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.4547 | 76.9094 | esox_lucius | ENSELUP00000055951 | 87.6761 | 76.2324 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.6323 | 77.4423 | oncorhynchus_kisutch | ENSOKIP00005018074 | 87.8521 | 76.7606 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.2771 | 77.4423 | oncorhynchus_kisutch | ENSOKIP00005016718 | 87.5 | 76.7606 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.2771 | 77.6199 | oncorhynchus_mykiss | ENSOMYP00000060800 | 87.5 | 76.9366 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.8099 | 77.7975 | oncorhynchus_mykiss | ENSOMYP00000039720 | 88.0282 | 77.1127 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 79.2185 | 68.0284 | salmo_salar | ENSSSAP00000065947 | 78.2456 | 67.193 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 87.2114 | 76.9094 | salmo_salar | ENSSSAP00000033580 | 86.1404 | 75.9649 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.4547 | 77.6199 | salmo_trutta | ENSSTUP00000011630 | 85.7143 | 75.2151 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.9876 | 77.087 | salmo_trutta | ENSSTUP00000090300 | 88.2042 | 76.4084 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 80.8171 | 69.8046 | gadus_morhua | ENSGMOP00000061402 | 77.381 | 66.8367 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 43.5169 | 33.9254 | chrysemys_picta_bellii | ENSCPBP00000034304 | 59.1787 | 46.1353 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 73.1794 | 58.0817 | xenopus_tropicalis | ENSXETP00000078431 | 69.0117 | 54.7739 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 79.5737 | 64.2984 | pseudonaja_textilis | ENSPTXP00000027444 | 79.1519 | 63.9576 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 71.4032 | 58.2593 | notechis_scutatus | ENSNSUP00000021982 | 80.2395 | 65.4691 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 55.595 | 39.4316 | ciona_savignyi | ENSCSAVP00000006543 | 56.0932 | 39.7849 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 68.9165 | 56.3055 | salvator_merianae | ENSSMRP00000003359 | 77.4451 | 63.2735 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 43.8721 | 33.9254 | laticauda_laticaudata | ENSLLTP00000005573 | 68.9944 | 53.352 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 84.1918 | 68.3837 | erpetoichthys_calabaricus | ENSECRP00000025177 | 82.5784 | 67.0732 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 80.1066 | 65.1865 | podarcis_muralis | ENSPMRP00000036779 | 62.379 | 50.7607 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.7904 | 74.4227 | scleropages_formosus | ENSSFOP00015072141 | 85.4867 | 74.1593 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 87.9218 | 74.4227 | sinocyclocheilus_grahami | ENSSGRP00000096776 | 87.6106 | 74.1593 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 75.4885 | 64.6536 | sinocyclocheilus_grahami | ENSSGRP00000076732 | 80.0377 | 68.5499 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.2575 | 73.7123 | denticeps_clupeoides | ENSDCDP00000015345 | 84.3585 | 72.935 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 78.8632 | 62.8774 | anolis_carolinensis | ENSACAP00000016825 | 77.8947 | 62.1053 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 67.4956 | 54.8845 | naja_naja | ENSNNAP00000018468 | 71.161 | 57.8652 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 89.698 | 78.3304 | myripristis_murdjan | ENSMMDP00005050850 | 90.0178 | 78.6096 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 84.7247 | 71.7584 | paramormyrops_kingsleyae | ENSPKIP00000026245 | 84.2756 | 71.3781 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.6323 | 77.4423 | oncorhynchus_tshawytscha | ENSOTSP00005003218 | 75.8359 | 66.2614 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 84.5471 | 74.0675 | oncorhynchus_tshawytscha | ENSOTSP00005052899 | 88.1481 | 77.2222 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 52.5755 | 44.7602 | terrapene_carolina_triunguis | ENSTMTP00000020660 | 74.7475 | 63.6364 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.968 | 75.4885 | pygocentrus_nattereri | ENSPNAP00000001716 | 89.6296 | 78.7037 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 80.6394 | 65.897 | leptobrachium_leishanense | ENSLLEP00000001746 | 71.3836 | 58.3333 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.4547 | 77.6199 | hucho_hucho | ENSHHUP00000015923 | 86.1592 | 75.6055 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 88.4547 | 77.9751 | hucho_hucho | ENSHHUP00000066008 | 87.6761 | 77.2887 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 72.4689 | 60.0355 | chelonoidis_abingdonii | ENSCABP00000003981 | 73.2495 | 60.6822 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 70.5151 | 57.5488 | gopherus_evgoodei | ENSGEVP00005027280 | 73.1123 | 59.6685 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 85.968 | 74.0675 | cyprinus_carpio_carpio | ENSCCRP00000109781 | 85.0615 | 73.2865 |
| ENSORLG00000016590 | oryzias_latipes | ENSORLP00000028138 | 86.6785 | 73.0018 | cyprinus_carpio_carpio | ENSCCRP00000064118 | 86.3717 | 72.7434 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
