RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSORLG00000013273	Gene ID	101163415	Accession	-
Symbol		Alias	-	Full Name	MKL/myocardin-like protein 1
Status	Confidence	Length	51442 bases	Strand	Minus strand
Position	8 : 18380448 - 18431889	RNA binding domain	SAP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSORLP00000016631	SAP	PF02037	1.5e-10	1
ENSORLP00000027839	SAP	PF02037	1.5e-10	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSORLT00000043391	3790	1117aa	ENSORLP00000027839
-	ENSORLT00000016632	3353	1055aa	ENSORLP00000016631

Gene Model

Click here to download ENSORLG00000013273's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSORLG00000013273's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00000013273	oryzias_latipes	ENSORLP00000003008	44.5803	32.6813	oryzias_latipes	ENSORLP00000027839	48.9705	35.8997
ENSORLG00000013273	oryzias_latipes	ENSORLP00000032724	37.4434	25	oryzias_latipes	ENSORLP00000027839	29.6329	19.7851
ENSORLG00000013273	oryzias_latipes	ENSORLP00000003719	38.403	27.2814	oryzias_latipes	ENSORLP00000027839	36.1683	25.6938
ENSORLG00000013273	oryzias_latipes	ENSORLP00000006425	43.3832	28.4235	oryzias_latipes	ENSORLP00000027839	33.7511	22.1128

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	48.4333	37.2426	fundulus_heteroclitus	ENSFHEP00000023973	49.3163	37.9216
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	41.0922	30.4387	xiphophorus_maculatus	ENSXMAP00000001261	46.789	34.6585
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	41.0027	31.3339	seriola_dumerili	ENSSDUP00000002611	42.5651	32.5279
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	7.87825	5.55058	cyclopterus_lumpus	ENSCLMP00005026538	46.0733	32.4607
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	45.479	36.5264	acanthochromis_polyacanthus	ENSAPOP00000000145	45.1957	36.2989
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	43.5989	34.1987	neolamprologus_brichardi	ENSNBRP00000007281	44.5155	34.9177
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	48.7019	38.3169	haplochromis_burtoni	ENSHBUP00000029370	45.485	35.786
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	52.3724	41.8084	lates_calcarifer	ENSLCAP00010010942	44.7248	35.7034
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	72.3366	66.6965	oryzias_javanicus	ENSOJAP00000033629	84.696	78.0922
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.5971	36.795	cyprinodon_variegatus	ENSCVAP00000002130	50.2267	37.262
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	48.8809	38.3169	maylandia_zebra	ENSMZEP00005008239	45.7286	35.8459
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	54.6106	53.2677	oryzias_sinensis	ENSOSIP00000010081	95.9119	93.5535
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	83.0797	76.6338	oryzias_melastigma	ENSOMEP00000035079	84.5943	78.031
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	6.89346	5.19248	oreochromis_niloticus	ENSONIP00000071231	55.7971	42.029
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	50.6714	40.9132	larimichthys_crocea	ENSLCRP00005017940	45.4254	36.6774
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	40.5551	31.0654	seriola_lalandi_dorsalis	ENSSLDP00000026660	42.1395	32.2791
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	47.359	37.0636	pundamilia_nyererei	ENSPNYP00000025487	45.8803	35.9063
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.5076	40.376	mastacembelus_armatus	ENSMAMP00000007777	43.509	35.4839
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	48.7019	38.1379	astatotilapia_calliptera	ENSACLP00000017580	45.5993	35.7083
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	50.0448	40.7341	stegastes_partitus	ENSSPAP00000017142	44.6843	36.3709
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	46.1056	34.4673	poecilia_reticulata	ENSPREP00000029833	49.0009	36.6318
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	42.6141	34.1092	gasterosteus_aculeatus	ENSGACP00000011104	51.073	40.8798
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	51.4772	41.5398	cottoperca_gobio	ENSCGOP00000002900	45.8899	37.0311
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	52.3724	42.077	dicentrarchus_labrax	ENSDLAP00005008066	45.5963	36.6329
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	61.4145	48.3438	kryptolebias_marmoratus	ENSKMAP00000022717	64.9007	51.088
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	28.5586	13.7869	caenorhabditis_elegans	T03G11.1c.1	24.1484	11.6578
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	33.8406	19.5166	drosophila_melanogaster	FBpp0310920	21.1409	12.1924
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	11.6383	7.16204	callorhinchus_milii	ENSCMIP00000009776	32.6633	20.1005
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	25.6043	17.6365	lepisosteus_oculatus	ENSLOCP00000014129	44.479	30.6376
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	36.974	26.7681	clupea_harengus	ENSCHAP00000031048	38.4186	27.814
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	43.8675	32.1397	danio_rerio	ENSDARP00000128445	43.8283	32.1109
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	44.8523	32.9454	carassius_auratus	ENSCARP00000031641	45.7952	33.638
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	42.8827	32.1397	carassius_auratus	ENSCARP00000026399	46.2802	34.686
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	10.0269	8.50492	astyanax_mexicanus	ENSAMXP00000054028	58.0311	49.2228
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	7.87825	5.99821	astyanax_mexicanus	ENSAMXP00000037250	61.9718	47.1831
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	15.667	11.8174	electrophorus_electricus	ENSEEEP00000023490	56.4516	42.5806
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	7.52014	6.62489	electrophorus_electricus	ENSEEEP00000023485	61.7647	54.4118
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.8657	37.4217	esox_lucius	ENSELUP00000006334	45.1012	33.8462
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.6867	37.3321	oncorhynchus_kisutch	ENSOKIP00005026931	44.0127	33.069
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	34.1987	25.2462	oncorhynchus_kisutch	ENSOKIP00005014768	48.8491	36.0614
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	33.393	24.7986	oncorhynchus_mykiss	ENSOMYP00000081008	48.2536	35.8344
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	4.65533	3.93912	oncorhynchus_mykiss	ENSOMYP00000143377	57.7778	48.8889
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	34.0197	24.9776	oncorhynchus_mykiss	ENSOMYP00000097232	48.0405	35.2718
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	4.65533	3.8496	oncorhynchus_mykiss	ENSOMYP00000112997	57.7778	47.7778
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.3286	37.3321	salmo_salar	ENSSSAP00000152546	44.257	33.494
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.3286	37.2426	salmo_salar	ENSSSAP00000138749	42.9128	32.3988
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.3286	37.3321	salmo_trutta	ENSSTUP00000067124	44.257	33.494
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	42.7932	33.393	salmo_trutta	ENSSTUP00000061020	47.4677	37.0407
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	4.2077	2.32766	dasypus_novemcinctus	ENSDNOP00000025177	46.5347	25.7426
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	4.5658	2.59624	loxodonta_africana	ENSLAFP00000029034	49.5146	28.1553
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	49.06	35.5416	scleropages_formosus	ENSSFOP00015017381	44.9918	32.5944
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	39.3912	28.6482	sinocyclocheilus_grahami	ENSSGRP00000108819	49.8301	36.2401
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	12.444	9.57923	sinocyclocheilus_grahami	ENSSGRP00000032468	57.9167	44.5833
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	45.2999	34.8254	denticeps_clupeoides	ENSDCDP00000032280	45.7505	35.1718
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	31.1549	23.2766	denticeps_clupeoides	ENSDCDP00000032319	49.1525	36.7232
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	4.9239	4.29722	myripristis_murdjan	ENSMMDP00005023527	61.7978	53.9326
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	8.86303	7.52014	myripristis_murdjan	ENSMMDP00005023514	55.9322	47.4576
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	45.7475	35.094	paramormyrops_kingsleyae	ENSPKIP00000013736	40.8473	31.3349
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	28.2901	20.3223	oncorhynchus_tshawytscha	ENSOTSP00005089399	43.7673	31.4404
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	33.3035	25.3357	oncorhynchus_tshawytscha	ENSOTSP00005059017	52.6912	40.085
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	4.83438	2.68577	heterocephalus_glaber_female	ENSHGLP00000059696	41.2214	22.9008
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	8.59445	6.08774	pygocentrus_nattereri	ENSPNAP00000013498	56.1404	39.7661
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	41.8979	32.5873	hucho_hucho	ENSHHUP00000029317	50.8143	39.5223
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	41.2713	32.1397	hucho_hucho	ENSHHUP00000064995	49.9458	38.8949
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	45.3894	33.7511	cyprinus_carpio_carpio	ENSCCRP00000153438	46.049	34.2416
ENSORLG00000013273	oryzias_latipes	ENSORLP00000027839	45.0313	33.393	cyprinus_carpio_carpio	ENSCCRP00000139099	45.9781	34.0951

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression