RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSORLG00000006418	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	411 bases	Strand	Plus strand
Position	2 : 23955343 - 23955753	RNA binding domain	RnaseA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSORLP00000008060	RnaseA	PF00074	2.3e-12	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSORLT00000008061	411	136aa	ENSORLP00000008060

Gene Model

Click here to download ENSORLG00000006418's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSORLG00000006418's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00000006418

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSORLG00000006418	oryzias_latipes	ENSORLP00000008060	50	37.5	oryzias_sinensis	ENSOSIP00000015529	48.227	36.1702
ENSORLG00000006418	oryzias_latipes	ENSORLP00000008060	69.1176	60.2941	oryzias_sinensis	ENSOSIP00000003022	72.8682	63.5659

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression