RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSOPRG00000009675	Gene ID	101522213	Accession	-
Symbol		Alias	-	Full Name	DNA-directed RNA polymerases I, II, and III subunit RPABC5
Status	Confidence	Length	745 bases	Strand	Plus strand
Position	GeneScaffold_1181 : 320084 - 320828	RNA binding domain	RNA_pol_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOPRP00000008829	RNA_pol_N	PF01194	1.3e-32	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOPRT00000009658	204	67aa	ENSOPRP00000008829

Gene Model

Click here to download ENSOPRG00000009675's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOPRG00000009675's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000001563	100	98.5075	ochotona_princeps	ENSOPRP00000008829	100	98.5075

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	ornithorhynchus_anatinus	ENSOANP00000051770	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	95.5224	83.5821	caenorhabditis_elegans	Y37E3.3.1	95.5224	83.5821
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	98.5075	92.5373	drosophila_melanogaster	FBpp0084067	98.5075	92.5373
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	98.5075	97.0149	eptatretus_burgeri	ENSEBUP00000000193	98.5075	97.0149
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	98.5075	97.0149	eptatretus_burgeri	ENSEBUP00000016487	98.5075	97.0149
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	latimeria_chalumnae	ENSLACP00000019989	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	clupea_harengus	ENSCHAP00000013104	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	danio_rerio	ENSDARP00000075655	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	carassius_auratus	ENSCARP00000002803	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	carassius_auratus	ENSCARP00000029564	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	astyanax_mexicanus	ENSAMXP00000032571	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	ictalurus_punctatus	ENSIPUP00000025757	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	electrophorus_electricus	ENSEEEP00000001997	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	esox_lucius	ENSELUP00000008972	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	oncorhynchus_kisutch	ENSOKIP00005004172	50	49.2537
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	86.5672	83.5821	oncorhynchus_kisutch	ENSOKIP00005029576	80.5556	77.7778
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	oncorhynchus_mykiss	ENSOMYP00000054832	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	oncorhynchus_mykiss	ENSOMYP00000079667	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	salmo_salar	ENSSSAP00000060777	55.3719	54.5455
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	gadus_morhua	ENSGMOP00000039372	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	salmo_trutta	ENSSTUP00000058680	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	salmo_trutta	ENSSTUP00000043356	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	fundulus_heteroclitus	ENSFHEP00000032979	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	poecilia_reticulata	ENSPREP00000033875	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	xiphophorus_maculatus	ENSXMAP00000007281	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	oryzias_latipes	ENSORLP00000026789	98.5294	98.5294
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	oreochromis_niloticus	ENSONIP00000078586	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	haplochromis_burtoni	ENSHBUP00000012080	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	astatotilapia_calliptera	ENSACLP00000039565	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	sparus_aurata	ENSSAUP00010008280	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	lates_calcarifer	ENSLCAP00010018110	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	xenopus_tropicalis	ENSXETP00000054691	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	chrysemys_picta_bellii	ENSCPBP00000009192	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	crocodylus_porosus	ENSCPRP00005021886	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	92.5373	88.0597	sphenodon_punctatus	ENSSPUP00000006806	66.6667	63.4409
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	98.5075	95.5224	laticauda_laticaudata	ENSLLTP00000016202	98.5075	95.5224
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	notechis_scutatus	ENSNSUP00000022894	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	pseudonaja_textilis	ENSPTXP00000001544	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	anas_platyrhynchos_platyrhynchos	ENSAPLP00000023630	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	gallus_gallus	ENSGALP00010036234	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	meleagris_gallopavo	ENSMGAP00000012154	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	serinus_canaria	ENSSCAP00000020148	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	pelodiscus_sinensis	ENSPSIP00000015526	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	chelonoidis_abingdonii	ENSCABP00000025288	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	seriola_dumerili	ENSSDUP00000011986	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	ficedula_albicollis	ENSFALP00000012591	48.5507	47.8261
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	cynoglossus_semilaevis	ENSCSEP00000002979	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	cyprinodon_variegatus	ENSCVAP00000005930	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	neolamprologus_brichardi	ENSNBRP00000017935	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	geospiza_fortis	ENSGFOP00000011027	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	stegastes_partitus	ENSSPAP00000025562	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	acanthochromis_polyacanthus	ENSAPOP00000008889	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	oryzias_melastigma	ENSOMEP00000018749	98.5294	98.5294
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	98.5075	98.5075	labrus_bergylta	ENSLBEP00000001181	98.5075	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	anabas_testudineus	ENSATEP00000011389	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	larimichthys_crocea	ENSLCRP00005033657	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	anolis_carolinensis	ENSACAP00000025509	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	betta_splendens	ENSBSLP00000035447	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	coturnix_japonica	ENSCJPP00005023267	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	poecilia_latipinna	ENSPLAP00000008201	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	scophthalmus_maximus	ENSSMAP00000035001	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	97.0149	myripristis_murdjan	ENSMMDP00005000221	100	97.0149
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	86.5672	80.597	cyprinus_carpio_carpio	ENSCCRP00000116154	92.0635	85.7143
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	oryzias_javanicus	ENSOJAP00000037386	98.5294	98.5294
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	94.0299	94.0299	oryzias_javanicus	ENSOJAP00000040853	92.6471	92.6471
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	paramormyrops_kingsleyae	ENSPKIP00000041408	83.75	83.75
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	dicentrarchus_labrax	ENSDLAP00005063944	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	pygocentrus_nattereri	ENSPNAP00000009598	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	amphilophus_citrinellus	ENSACIP00000007010	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	terrapene_carolina_triunguis	ENSTMTP00000013698	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	aquila_chrysaetos_chrysaetos	ENSACCP00020015329	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	97.0149	91.0448	ciona_savignyi	ENSCSAVP00000010311	97.0149	91.0448
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	97.0149	scleropages_formosus	ENSSFOP00015067546	100	97.0149
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	podarcis_muralis	ENSPMRP00000009720	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	takifugu_rubripes	ENSTRUP00000044304	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	anser_brachyrhynchus	ENSABRP00000016170	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	poecilia_formosa	ENSPFOP00000004518	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	gopherus_evgoodei	ENSGEVP00005019261	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	leptobrachium_leishanense	ENSLLEP00000015642	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	leptobrachium_leishanense	ENSLLEP00000018449	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	nothobranchius_furzeri	ENSNFUP00015039313	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	kryptolebias_marmoratus	ENSKMAP00000004285	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	98.5075	98.5075	hippocampus_comes	ENSHCOP00000021677	98.5075	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	mastacembelus_armatus	ENSMAMP00000032600	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	amphiprion_percula	ENSAPEP00000021515	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	oncorhynchus_tshawytscha	ENSOTSP00005002810	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	86.5672	83.5821	oncorhynchus_tshawytscha	ENSOTSP00005054806	80.5556	77.7778
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	seriola_lalandi_dorsalis	ENSSLDP00000031267	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	sander_lucioperca	ENSSLUP00000026809	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	maylandia_zebra	ENSMZEP00005001115	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	97.0149	sinocyclocheilus_grahami	ENSSGRP00000061048	100	97.0149
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	97.0149	sinocyclocheilus_grahami	ENSSGRP00000078254	100	97.0149
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	amphiprion_ocellaris	ENSAOCP00000008354	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	naja_naja	ENSNNAP00000010167	49.2647	48.5294
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	86.5672	85.0746	salvator_merianae	ENSSMRP00000018173	55.7692	54.8077
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	erpetoichthys_calabaricus	ENSECRP00000008029	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	85.0746	74.6269	saccharomyces_cerevisiae	YOR210W	81.4286	71.4286
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	struthio_camelus_australis	ENSSCUP00000017610	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	hucho_hucho	ENSHHUP00000028186	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	98.5075	hucho_hucho	ENSHHUP00000022240	100	98.5075
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	oryzias_sinensis	ENSOSIP00000016046	98.5294	98.5294
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	pundamilia_nyererei	ENSPNYP00000009691	100	100
ENSOPRG00000009675	ochotona_princeps	ENSOPRP00000008829	100	100	cottoperca_gobio	ENSCGOP00000007897	65.0485	65.0485

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression