Description

Ensembl ID ENSONIG00000028490 Gene ID 100703672 Accession -
Symbol prpf38b Alias - Full Name pre-mRNA processing factor 38B
Status Confidence Length 5787 bases Strand Plus strand
Position LG18 : 13512732 - 13518518 RNA binding domain PRP38
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSONIP00000050131 PRP38 PF03371 8.9e-51 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
prpf38b-201 ENSONIT00000061420 1386 461aa ENSONIP00000050131

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSONIG00000028490oreochromis_niloticusENSONIP0000000984748.543732.6861oreochromis_niloticusENSONIP0000005013132.53821.9089

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.143288.0694poecilia_reticulataENSPREP0000002311393.736587.689
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.793988.2863xiphophorus_maculatusENSXMAP0000003532994.384587.905
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013193.926288.0694cyclopterus_lumpusENSCLMP0000501184289.64884.058
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.143286.9848oryzias_latipesENSORLP0000001955594.759887.5546
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013136.008735.7918amphilophus_citrinellusENSACIP0000002120096.511695.9302
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013179.609575.705tetraodon_nigroviridisENSTNIP0000001836190.617386.1728
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013193.275586.9848takifugu_rubripesENSTRUP0000002970193.275586.9848
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013193.492485.4664hippocampus_comesENSHCOP0000000029094.517586.4035
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013136.008735.141scophthalmus_maximusENSSMAP0000000290090.217488.0435
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013193.275588.7202sparus_aurataENSSAUP0001004057589.958285.5648
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013138.611736.4425cyprinodon_variegatusENSCVAP0000000424185.576980.7692
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013192.841787.6356cottoperca_gobioENSCGOP0000002285890.105385.0526
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013138.611736.6594oryzias_javanicusENSOJAP0000004989186.407882.0388
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.57785.9002cynoglossus_semilaevisENSCSEP0000002356094.57785.9002
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.143287.6356oryzias_melastigmaENSOMEP0000002020294.759888.2096
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013195.661693.4924anabas_testudineusENSATEP0000002078195.043192.8879
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.57788.9371poecilia_formosaENSPFOP0000000395194.168588.5529
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013136.876435.5748sander_luciopercaENSSLUP0000000523790.909187.7005
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013197.1893.4924lates_calcariferENSLCAP0001003403395.726592.094
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013197.1894.3601seriola_lalandi_dorsalisENSSLDP0000003052295.931593.1478
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013136.876435.5748seriola_dumeriliENSSDUP0000002279492.391389.1304
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013195.010888.5033kryptolebias_marmoratusENSKMAP0000000735892.993686.6242
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013136.008735.7918neolamprologus_brichardiENSNBRP0000002514598.224997.6331
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.143290.6725betta_splendensENSBSLP0000003742094.759891.2664
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013193.926287.4187oryzias_sinensisENSOSIP0000000141294.541587.9913
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013193.058686.7679nothobranchius_furzeriENSNFUP0001504826593.464187.146
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.793988.9371poecilia_latipinnaENSPLAP0000001583294.384588.5529
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013141.648629.0672caenorhabditis_elegansY108G3AL.2.258.715640.9786
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013155.314542.5163drosophila_melanogasterFBpp007358864.070449.2462
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013127.982625.3796petromyzon_marinusENSPMAP0000000787282.692375
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.344967.0282callorhinchus_miliiENSCMIP0000002212170.356557.9737
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.429569.4143latimeria_chalumnaeENSLACP0000001761270.370459.2593
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013129.71829.0672carassius_auratusENSCARP0000009821886.708984.8101
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.297274.1866carassius_auratusENSCARP0000010563781.702172.766
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.297274.1866carassius_auratusENSCARP0000001138981.702172.766
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013173.535864.6421astyanax_mexicanusENSAMXP0000005200157.555250.5942
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.429572.0174electrophorus_electricusENSEEEP0000003098176.458866.8008
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013188.069480.6941esox_luciusENSELUP0000003248876.893970.4545
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013184.164975.2711oncorhynchus_kisutchENSOKIP0000508858682.029673.3615
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013185.032578.0911oncorhynchus_kisutchENSOKIP0000505983179.191972.7273
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013184.598777.4403oncorhynchus_mykissENSOMYP0000005801075.875569.4553
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.947975.2711oncorhynchus_mykissENSOMYP0000003682180.290571.9917
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013184.815678.308salmo_salarENSSSAP0000008206677.733671.7694
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013184.164975.4881salmo_salarENSSSAP0000012531880.665372.3493
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013184.815678.308salmo_truttaENSSTUP0000009823978.67272.6358
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013184.381875.4881salmo_truttaENSSTUP0000003871481.894773.2632
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013185.900278.0911gadus_morhuaENSGMOP0000001292685.529277.7538
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.863369.6312parus_majorENSPMJP0000002640569.963458.7912
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.344969.8482laticauda_laticaudataENSLLTP0000000957767.084157.6029
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013178.091165.5098xenopus_tropicalisENSXETP0000007641871.713260.1594
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013180.911168.5466pseudonaja_textilisENSPTXP0000000691066.488456.328
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.646470.282delphinapterus_leucasENSDLEP0000001864969.908359.4495
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013158.568349.2408choloepus_hoffmanniENSCHOP0000000793285.714372.0635
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013137.093331.0195choloepus_hoffmanniENSCHOP0000000604237.915731.7073
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013172.88561.8221echinops_telfairiENSETEP000000119067563.6161
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.080370.7158gallus_gallusENSGALP0001001656669.763259.3807
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013119.088916.7028notechis_scutatusENSNSUP0000000845653.333346.6667
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013174.186663.9913physeter_catodonENSPCTP0000500646170.515560.8247
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.778770.0651sphenodon_punctatusENSSPUP0000002311969.047659.1575
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.778770.0651chrysemys_picta_belliiENSCPBP0000004124169.174359.2661
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.080369.8482serinus_canariaENSSCAP0000001623370.146558.9744
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013178.091166.1605sus_scrofaENSSSCP0000005930968.441157.9848
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013133.839532.1041macaca_fascicularisENSMFAP0000001038582.539778.3069
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013151.193142.2994notamacropus_eugeniiENSMEUP0000000443752.678643.5268
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013118.655116.9197heterocephalus_glaber_femaleENSHGLP0000003322162.773756.9343
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.080369.6312chinchilla_lanigeraENSCLAP0000000827369.890558.5766
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.863370.7158ailuropoda_melanoleucaENSAMEP0000000460661.912552.8363
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.429570.282pelodiscus_sinensisENSPSIP0000001863469.724859.4495
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.646470.4989camelus_dromedariusENSCDRP0000500472869.908359.633
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.646470.282balaenoptera_musculusENSBMSP0001000969670.036859.5588
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.646470.282tursiops_truncatusENSTTRP0000000613170.036859.5588
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.646470.282phocoena_sinusENSPSNP0000001211870.036859.5588
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.995769.8482capra_hircusENSCHIP0000002910769.613359.3002
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013174.186662.039vicugna_pacosENSVPAP0000000515063.333352.963
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.429568.5466cavia_porcellusENSCPOP0000003091269.981658.1952
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013184.815671.3666erpetoichthys_calabaricusENSECRP0000001930375.337263.3911
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.778769.4143microtus_ochrogasterENSMOCP0000002362069.685859.1497
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013175.271163.1236tupaia_belangeriENSTBEP0000000648468.172957.1709
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013121.041217.5705chelonoidis_abingdoniiENSCABP0000001199351.595743.0851
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.646469.6312aquila_chrysaetos_chrysaetosENSACCP0002001326369.652658.6837
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.646470.0651monodon_monocerosENSMMNP0001500661370.036859.375
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.778768.7636ornithorhynchus_anatinusENSOANP0000005136866.725756.1062
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.429572.4512paramormyrops_kingsleyaeENSPKIP0000004026569.597161.1722
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.561870.0651gopherus_evgoodeiENSGEVP0000501475968.990859.2661
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.995769.8482ovis_aries_rambouilletENSOARP0002000599669.613359.3002
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.863370.7158canis_lupus_familiarisENSCAFP0084501138162.01352.9221
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.995769.8482bos_indicus_hybridENSBIXP0000500740769.613359.3002
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.995768.9805otolemur_garnettiiENSOGAP0000001764469.104258.1353
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.863370.4989coturnix_japonicaENSCJPP0000502717669.581159.1985
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.344969.1974mus_spicilegusENSMSIP0000002354469.316158.9649
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013180.043467.8959naja_najaENSNNAP0000000533053.711845.5604
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.212670.0651cervus_hanglu_yarkandensisENSCHYP0000002806669.797459.4843
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.561870.0651podarcis_muralisENSPMRP0000001607665.849456.5674
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013177.440364.6421leptobrachium_leishanenseENSLLEP0000003633071.975860.0806
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.995769.8482bos_taurusENSBTAP0000005559469.613359.3002
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013160.303748.1562ochotona_princepsENSOPRP0000001234751.481541.1111
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013173.969662.039canis_lupus_dingoENSCAFP0002001365766.994156.1886
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.995770.282monodelphis_domesticaENSMODP0000000286369.104259.2322
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013186.117175.4881pygocentrus_nattereriENSPNAP0000001180178.303768.6391
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.344973.3189hucho_huchoENSHHUP0000004462979.787271.9149
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013186.117177.4403denticeps_clupeoidesENSDCDP0000002482482.536474.2204
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013153.145342.7332ciona_savignyiENSCSAVP0000001602970.200656.447
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.212669.8482rattus_norvegicusENSRNOP0000002773869.926259.4096
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013119.956618.872sinocyclocheilus_grahamiENSSGRP0000001739195.833390.625
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.73172.6681sinocyclocheilus_grahamiENSSGRP0000008150578.775568.3673
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013165.726754.013sinocyclocheilus_grahamiENSSGRP0000009231172.48859.5694
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.429570.0651catagonus_wagneriENSCWAP0000000359669.597159.1575
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.947975.0542cyprinus_carpio_carpioENSCCRP0000005661981.818273.1501
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.080370.4989scleropages_formosusENSSFOP0001501750669.890559.3066
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013173.535859.2191ficedula_albicollisENSFALP0000000278565.825253.0097
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013183.080369.6312taeniopygia_guttataENSTGUP0000000472370.146558.7912
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.212670.0651moschus_moschiferusENSMMSP0000000434669.797459.4843
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013180.477267.8959moschus_moschiferusENSMMSP0000000813868.959158.1784
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013113.015212.5813moschus_moschiferusENSMMSP0000001884764.516162.3656
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.778770.282terrapene_carolina_triunguisENSTMTP0000002397369.174359.4495
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013181.778770.282terrapene_carolina_triunguisENSTMTP0000001570669.174359.4495
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013185.032578.0911oncorhynchus_tshawytschaENSOTSP0000503341279.191972.7273
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013194.793989.3709myripristis_murdjanENSMMDP0000500734989.183784.0816
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.429570.7158anolis_carolinensisENSACAP0000002329157.488749.3192
ENSONIG00000028490oreochromis_niloticusENSONIP0000005013182.863369.8482strigops_habroptilaENSSHBP0000501616469.835558.8665

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression