RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSONIG00000001097	Gene ID	100701291	Accession	-
Symbol	rnaset2l	Alias	-	Full Name	ribonuclease T2
Status	Confidence	Length	12008 bases	Strand	Minus strand
Position	LG14 : 38137406 - 38149413	RNA binding domain	Ribonuclease_T2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSONIP00000001388	Ribonuclease_T2	PF00445	1.5e-39	1
ENSONIP00000001389	Ribonuclease_T2	PF00445	1.1e-37	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
rnaset2l-201	ENSONIT00000001387	961	275aa	ENSONIP00000001388
rnaset2l-202	ENSONIT00000001388	1152	324aa	ENSONIP00000001389

Gene Model

Click here to download ENSONIG00000001097's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSONIG00000001097's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000006945	35.124	23.1405	oreochromis_niloticus	ENSONIP00000001389	26.2346	17.284

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	50.9259	44.1358	fundulus_heteroclitus	ENSFHEP00000011041	56.5069	48.9726
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	54.0123	41.9753	poecilia_reticulata	ENSPREP00000009821	65.0558	50.5576
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	54.0123	42.5926	xiphophorus_maculatus	ENSXMAP00000033977	50.7246	40
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	53.3951	44.4444	cyclopterus_lumpus	ENSCLMP00005009064	64.3123	53.5316
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	52.1605	42.5926	oryzias_latipes	ENSORLP00000030607	63.0597	51.4925
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	41.9753	33.642	tetraodon_nigroviridis	ENSTNIP00000003987	70.4663	56.4767
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	39.1975	32.4074	takifugu_rubripes	ENSTRUP00000056156	59.3458	49.0654
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	34.2593	29.321	acanthochromis_polyacanthus	ENSAPOP00000010540	63.0682	53.9773
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.6049	38.8889	hippocampus_comes	ENSHCOP00000019535	40.0531	33.4217
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	55.8642	45.679	scophthalmus_maximus	ENSSMAP00000007625	61.5646	50.3401
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	52.1605	43.8272	sparus_aurata	ENSSAUP00010000252	63.2959	53.1835
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	55.5556	45.9877	cyprinodon_variegatus	ENSCVAP00000023834	63.6042	52.6502
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	68.8272	66.6667	astatotilapia_calliptera	ENSACLP00000016251	82.5926	80
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	58.3333	50.9259	stegastes_partitus	ENSSPAP00000013739	69.2308	60.4396
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	57.4074	49.0741	cottoperca_gobio	ENSCGOP00000032239	70.1887	60
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	51.2346	43.5185	oryzias_javanicus	ENSOJAP00000011088	61.9403	52.6119
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	45.679	33.9506	cynoglossus_semilaevis	ENSCSEP00000024634	58.2677	43.3071
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	50.6173	42.284	oryzias_melastigma	ENSOMEP00000018050	57.7465	48.2394
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	53.3951	43.8272	anabas_testudineus	ENSATEP00000003894	65.283	53.5849
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	54.9383	42.9012	poecilia_formosa	ENSPFOP00000000627	65.6827	51.2915
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	40.4321	33.642	seriola_lalandi_dorsalis	ENSSLDP00000010388	60.3687	50.2304
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	39.5062	33.642	seriola_dumerili	ENSSDUP00000019915	60.3774	51.4151
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.2963	39.8148	labrus_bergylta	ENSLBEP00000021073	66.6667	57.3333
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	60.4938	58.9506	pundamilia_nyererei	ENSPNYP00000012241	80	77.9592
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	39.1975	32.716	amphiprion_ocellaris	ENSAOCP00000027366	62.2549	51.9608
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	62.6543	61.1111	neolamprologus_brichardi	ENSNBRP00000006359	79.6078	77.6471
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	51.5432	44.4444	mastacembelus_armatus	ENSMAMP00000029409	63.4981	54.7529
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	68.8272	66.6667	maylandia_zebra	ENSMZEP00005000039	82.5926	80
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	57.0988	47.8395	amphiprion_percula	ENSAPEP00000029783	68.0147	56.9853
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	54.321	47.8395	dicentrarchus_labrax	ENSDLAP00005028561	63.5379	55.9567
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	54.6296	46.9136	larimichthys_crocea	ENSLCRP00005020015	56.7308	48.7179
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	54.0123	41.9753	poecilia_latipinna	ENSPLAP00000025800	64.5756	50.1845
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	28.0864	16.9753	caenorhabditis_elegans	K10C9.3.1	32.6165	19.7133
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	30.5556	19.7531	drosophila_melanogaster	FBpp0076469	30.4615	19.6923
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	29.9383	18.5185	ciona_intestinalis	ENSCINP00000030837	39.2713	24.2915
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	21.9136	11.7284	callorhinchus_milii	ENSCMIP00000009331	45.5128	24.359
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	33.3333	25.9259	lepisosteus_oculatus	ENSLOCP00000018088	63.1579	49.1228
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	38.5802	28.7037	danio_rerio	ENSDARP00000075733	54.5852	40.6114
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	41.9753	28.0864	carassius_auratus	ENSCARP00000048400	52.1073	34.8659
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	43.2099	29.9383	astyanax_mexicanus	ENSAMXP00000037728	53.0303	36.7424
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	42.9012	29.321	ictalurus_punctatus	ENSIPUP00000010988	53.4615	36.5385
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	44.1358	29.9383	electrophorus_electricus	ENSEEEP00000052412	54.3726	36.8821
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.9136	34.8765	esox_lucius	ENSELUP00000033276	57.5758	42.803
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	45.0617	34.5679	oncorhynchus_kisutch	ENSOKIP00005074274	57.2549	43.9216
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.2963	36.4198	oncorhynchus_kisutch	ENSOKIP00005087760	57.4713	45.2107
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	45.3704	34.5679	oncorhynchus_mykiss	ENSOMYP00000097403	56.9767	43.4109
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.6049	36.4198	oncorhynchus_mykiss	ENSOMYP00000056155	55.3114	43.2234
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.9136	37.037	salmo_salar	ENSSSAP00000047267	58.2375	45.977
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.9136	37.037	salmo_trutta	ENSSTUP00000010337	58.2375	45.977
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	45.3704	35.1852	gadus_morhua	ENSGMOP00000057549	54.8507	42.5373
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	35.4938	23.7654	sphenodon_punctatus	ENSSPUP00000015219	47.5207	31.8182
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	37.037	24.3827	chrysemys_picta_bellii	ENSCPBP00000008880	49.1803	32.377
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	41.6667	31.1728	erpetoichthys_calabaricus	ENSECRP00000026586	53.5714	40.0794
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	31.1728	19.4444	saccharomyces_cerevisiae	YPL123C	23.2719	14.5161
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	41.9753	30.8642	paramormyrops_kingsleyae	ENSPKIP00000022051	53.3333	39.2157
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	36.7284	23.7654	gopherus_evgoodei	ENSGEVP00005008151	48.7705	31.5574
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	36.1111	25.6173	salvator_merianae	ENSSMRP00000019713	46.8	33.2
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	33.3333	23.4568	naja_naja	ENSNNAP00000026144	42.8571	30.1587
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	37.963	26.5432	podarcis_muralis	ENSPMRP00000021684	48.2353	33.7255
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	38.2716	28.3951	pygocentrus_nattereri	ENSPNAP00000004506	55.6054	41.2556
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	40.4321	31.1728	hucho_hucho	ENSHHUP00000084491	48.3395	37.2694
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	36.4198	27.1605	denticeps_clupeoides	ENSDCDP00000012775	45.0382	33.5878
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	31.4815	18.8272	ciona_savignyi	ENSCSAVP00000011340	38.6364	23.1061
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	41.358	28.7037	sinocyclocheilus_grahami	ENSSGRP00000021030	52.549	36.4706
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	41.9753	28.7037	cyprinus_carpio_carpio	ENSCCRP00000119027	52.1073	35.6322
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	46.2963	36.4198	oncorhynchus_tshawytscha	ENSOTSP00005039545	57.4713	45.2107
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	45.0617	34.5679	oncorhynchus_tshawytscha	ENSOTSP00005034531	57.2549	43.9216
ENSONIG00000001097	oreochromis_niloticus	ENSONIP00000001389	33.9506	21.2963	anolis_carolinensis	ENSACAP00000037043	37.2881	23.3898

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression