Description

Ensembl ID ENSOMYG00000010788 Gene ID Accession -
Symbol rbm4.2 Alias - Full Name RNA binding motif protein 4.2
Status Confidence Length 3065 bases Strand Minus strand
Position 9 : 27301560 - 27304624 RNA binding domain RRM_5 , RRM_1 , zf-CCHC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSOMYP00000022563 RRM_5 PF13893 1.5e-07 1
ENSOMYP00000022563 RRM_1 PF00076 6.7e-34 2
ENSOMYP00000022563 RRM_1 PF00076 6.7e-34 3
ENSOMYP00000022563 zf-CCHC PF00098 2e-05 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
rbm4.2-201 ENSOMYT00000024727 2526 407aa ENSOMYP00000022563

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003439550.877233.7719oncorhynchus_mykissENSOMYP0000002256328.501218.9189
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003446160.326147.2826oncorhynchus_mykissENSOMYP0000002256354.545542.7518
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003194855.064942.0779oncorhynchus_mykissENSOMYP0000002256352.088539.8034
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000009495014.04118.04795oncorhynchus_mykissENSOMYP0000002256320.147411.5479
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000012036621.674913.7931oncorhynchus_mykissENSOMYP0000002256321.621613.7592
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000007606516.85399.4382oncorhynchus_mykissENSOMYP0000002256318.427510.3194
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000008981018.439711.5839oncorhynchus_mykissENSOMYP0000002256319.164612.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000013006420.459812.6437oncorhynchus_mykissENSOMYP0000002256321.867313.5135
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000912226.433114.3312oncorhynchus_mykissENSOMYP0000002256320.393111.0565
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000010725720.58827.35294oncorhynchus_mykissENSOMYP0000002256310.31943.6855
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003297919.127511.0738oncorhynchus_mykissENSOMYP0000002256328.009816.2162
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002797718.697810.6845oncorhynchus_mykissENSOMYP0000002256327.518415.7248
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000001149023.902411.9512oncorhynchus_mykissENSOMYP0000002256324.078612.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP000000827892512.1287oncorhynchus_mykissENSOMYP0000002256324.815712.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000184026.598512.7877oncorhynchus_mykissENSOMYP0000002256325.552812.285
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000006526426.020412.7551oncorhynchus_mykissENSOMYP0000002256325.061412.285
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000005269326.108414.0394oncorhynchus_mykissENSOMYP0000002256326.044214.0049
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000009370123.542612.3318oncorhynchus_mykissENSOMYP0000002256325.798513.5135
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003872327.516817.4497oncorhynchus_mykissENSOMYP0000002256320.147412.7764
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000907026.989616.263oncorhynchus_mykissENSOMYP0000002256319.164611.5479
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000007459524.858814.4068oncorhynchus_mykissENSOMYP0000002256321.621612.5307
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003017024.376714.6814oncorhynchus_mykissENSOMYP0000002256321.621613.0221
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000004289225.214914.0401oncorhynchus_mykissENSOMYP0000002256321.621612.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000831025.142914oncorhynchus_mykissENSOMYP0000002256321.621612.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003483229.951719.8068oncorhynchus_mykissENSOMYP0000002256315.233410.0737
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000011116428.9119.9052oncorhynchus_mykissENSOMYP0000002256314.987710.3194
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000004240330.459820.6897oncorhynchus_mykissENSOMYP0000002256313.02218.84521
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003480729.946519.7861oncorhynchus_mykissENSOMYP0000002256313.75929.09091
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000009875725.308614.8148oncorhynchus_mykissENSOMYP0000002256320.147411.7936
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000006464725.308615.1235oncorhynchus_mykissENSOMYP0000002256320.147412.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000006305427.45115.6863oncorhynchus_mykissENSOMYP0000002256313.75927.86241
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000103427.317115.6098oncorhynchus_mykissENSOMYP0000002256313.75927.86241
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000964523.509913.9073oncorhynchus_mykissENSOMYP0000002256317.444710.3194
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000963423.934413.7705oncorhynchus_mykissENSOMYP0000002256317.936110.3194
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000354615.14425.76923oncorhynchus_mykissENSOMYP0000002256315.47915.89681
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000005876014.83255.50239oncorhynchus_mykissENSOMYP0000002256315.23345.65111
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000005867825.125615.5779oncorhynchus_mykissENSOMYP0000002256324.5715.2334
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000007520425.945916.4865oncorhynchus_mykissENSOMYP0000002256323.587214.9877
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003586435.483920.7373oncorhynchus_mykissENSOMYP0000002256318.918911.0565
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000011230416.7489.43089oncorhynchus_mykissENSOMYP0000002256325.307114.2506
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000011452915.53548.59729oncorhynchus_mykissENSOMYP0000002256325.307114.0049
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000013148520.909112oncorhynchus_mykissENSOMYP0000002256328.255516.2162
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000001680318.119310.7798oncorhynchus_mykissENSOMYP0000002256319.410311.5479
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000429417.889910.7798oncorhynchus_mykissENSOMYP0000002256319.164611.5479
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000006989621.153811.8132oncorhynchus_mykissENSOMYP0000002256318.918910.5651
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000332914.43777.44681oncorhynchus_mykissENSOMYP0000002256323.341512.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000010015915.73037.86517oncorhynchus_mykissENSOMYP0000002256320.638810.3194
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000012956515.75097.50916oncorhynchus_mykissENSOMYP0000002256321.130210.0737
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002102610.37535.84989oncorhynchus_mykissENSOMYP0000002256323.095813.0221
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000004994423.2514.5oncorhynchus_mykissENSOMYP0000002256322.850114.2506
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000005148729.179316.7173oncorhynchus_mykissENSOMYP0000002256323.587213.5135
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000005410129.498516.8142oncorhynchus_mykissENSOMYP0000002256324.5714.0049
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003038637.053618.75oncorhynchus_mykissENSOMYP0000002256320.393110.3194
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003582231.048416.129oncorhynchus_mykissENSOMYP0000002256318.91899.82801
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000000659325.675716.2162oncorhynchus_mykissENSOMYP0000002256323.341514.742
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000001043722.90513.6872oncorhynchus_mykissENSOMYP0000002256320.147412.0393
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000005985725.201116.0858oncorhynchus_mykissENSOMYP0000002256323.095814.742
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000001035225.936615.8501oncorhynchus_mykissENSOMYP0000002256322.11313.5135
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000004105920.360410.4505oncorhynchus_mykissENSOMYP0000002256327.764114.2506
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000001176920.786510.8614oncorhynchus_mykissENSOMYP0000002256327.272714.2506
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000008090221.97810.2564oncorhynchus_mykissENSOMYP0000002256329.48413.7592
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000012376421.212110.0379oncorhynchus_mykissENSOMYP0000002256327.518413.0221
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002624719.379813.6951oncorhynchus_mykissENSOMYP0000002256318.427513.0221
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000008768919.060113.3159oncorhynchus_mykissENSOMYP0000002256317.936112.5307
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000003853631.413620.4188oncorhynchus_mykissENSOMYP0000002256314.7429.58231
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000005629530.653320.1005oncorhynchus_mykissENSOMYP0000002256314.98779.82801
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000010034326.262616.1616oncorhynchus_mykissENSOMYP0000002256312.77647.86241
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000010949134.615421.5385oncorhynchus_mykissENSOMYP0000002256311.05656.87961
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002253662.444452.4444oncorhynchus_mykissENSOMYP0000002256369.041857.9853
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000006922468.93261.4078oncorhynchus_mykissENSOMYP0000002256369.778962.1622
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000006266753.773637.1069oncorhynchus_mykissENSOMYP0000002256342.014728.9926

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256333.660925.3071petromyzon_marinusENSPMAP0000000373664.319348.3568
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256348.648637.3464eptatretus_burgeriENSEBUP0000001116755.61842.6966
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256349.631538.0835eptatretus_burgeriENSEBUP0000001283152.604240.3646
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256329.975425.5528lepisosteus_oculatusENSLOCP0000000325981.879269.7987
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256370.024657.7396danio_rerioENSDARP0000010292874.218861.1979
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.990260.1966clupea_harengusENSCHAP0000000918872.167560.3448
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256370.761760.1966carassius_auratusENSCARP000000255437563.8021
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256369.287558.4767carassius_auratusENSCARP0000012063073.629262.141
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256329.975423.5872astyanax_mexicanusENSAMXP0000004008576.729660.3774
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256369.533257.2482ictalurus_punctatusENSIPUP0000003413474.278261.1549
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256369.041857.2482electrophorus_electricusENSEEEP0000001187673.560260.9948
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256385.749481.0811esox_luciusENSELUP0000001302989.030684.1837
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256369.533257.4939cyclopterus_lumpusENSCLMP0000505041675.066362.069
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256348.40341.2776lates_calcariferENSLCAP0001003379670.106859.7865
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256366.339155.0369xiphophorus_maculatusENSXMAP0000002124871.428659.2593
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256379.115574.6929salmo_salarENSSSAP0000000454473.181869.0909
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256362.407951.3514poecilia_reticulataENSPREP0000000545667.553255.5851
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256331.449625.3071haplochromis_burtoniENSHBUP0000001008383.116966.8831
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256353.31740.5405xenopus_tropicalisENSXETP0000011783764.201248.8166
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256368.796154.2998takifugu_rubripesENSTRUP0000003394873.878658.3113
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256336.363628.7469oreochromis_niloticusENSONIP0000003895864.347850.8696
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256362.653649.8772erpetoichthys_calabaricusENSECRP0000000188461.004848.5646
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256362.407951.1057erpetoichthys_calabaricusENSECRP0000000190959.484848.7119
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.253159.2138pygocentrus_nattereriENSPNAP0000002758875.916263.089
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.744560.688dicentrarchus_labraxENSDLAP0000504521580.219867.8571
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256331.203924.8157acanthochromis_polyacanthusENSAPOP0000000999786.986369.1781
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256331.449625.3071neolamprologus_brichardiENSNBRP0000002321582.580666.4516
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.007458.4767gasterosteus_aculeatusENSGACP0000000106176.45562.963
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256372.727361.1794cynoglossus_semilaevisENSCSEP0000002252576.485864.3411
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256332.923825.3071hippocampus_comesENSHCOP0000002313778.823560.5882
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256330.712525.0614poecilia_latipinnaENSPLAP0000002885579.617864.9682
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256373.464462.1622sander_luciopercaENSSLUP0000001484979.100566.9312
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256329.729723.8329anabas_testudineusENSATEP0000000268787.681270.2899
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256373.710164.3735labrus_bergyltaENSLBEP0000002592278.740268.7664
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256372.235960.4423cottoperca_gobioENSCGOP0000005249079.459566.4865
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256331.203924.8157amphiprion_ocellarisENSAOCP0000000718786.986369.1781
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256366.584852.5799kryptolebias_marmoratusENSKMAP0000000870969.132754.5918
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256370.761761.1794sinocyclocheilus_grahamiENSSGRP0000008762475.195865.0131
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.007460.9337sinocyclocheilus_grahamiENSSGRP0000009910875.064964.4156
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.007457.2482paramormyrops_kingsleyaeENSPKIP0000000318868.321555.0827
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256376.412867.8133gadus_morhuaENSGMOP0000003144479.743670.7692
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256337.100728.7469maylandia_zebraENSMZEP0000503776950.333339
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256331.203923.8329maylandia_zebraENSMZEP0000501226677.43959.1463
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256330.466824.8157maylandia_zebraENSMZEP0000503777084.353768.7075
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256369.778954.7912tetraodon_nigroviridisENSTNIP0000000040375.132358.9947
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.990257.9853stegastes_partitusENSSPAP0000002518876.501361.6188
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256371.498860.688mastacembelus_armatusENSMAMP0000000248576.17864.6597
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256369.287556.0197astatotilapia_callipteraENSACLP0000001129974.210560
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256331.695325.5528pundamilia_nyerereiENSPNYP0000000602583.225867.0968
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256374.692964.1278seriola_lalandi_dorsalisENSSLDP0000001658678.96167.7922
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256378.869868.7961myripristis_murdjanENSMMDP0000501837083.81273.107
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256370.51657.2482scleropages_formosusENSSFOP0001507837068.333355.4762
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256362.162252.5799betta_splendensENSBSLP0000001138979.310367.0846
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256375.4365.1106seriola_dumeriliENSSDUP0000000530479.740368.8312
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256333.169527.2727amphilophus_citrinellusENSACIP0000002120582.317167.6829
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256332.432426.2899fundulus_heteroclitusENSFHEP0000000267686.842170.3947
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256332.678127.027cyprinus_carpio_carpioENSCCRP0000001674871.12358.8235
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256366.830555.2826poecilia_formosaENSPFOP0000001267271.767859.3668
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256368.550458.7224larimichthys_croceaENSLCRP0000501711177.071866.0221
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256368.05958.7224nothobranchius_furzeriENSNFUP0001501091673.866763.7333
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256330.958224.57amphiprion_perculaENSAPEP0000001330978.260962.1118
ENSOMYG00000010788oncorhynchus_mykissENSOMYP0000002256355.282640.0491leptobrachium_leishanenseENSLLEP0000002250766.56848.2249

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression