| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSOMEG00000014110 | Gene ID |
|
Accession |
- |
| Symbol |
srrm1 |
Alias |
- |
Full Name |
serine/arginine repetitive matrix 1 |
| Status |
Confidence |
Length |
10150 bases |
Strand |
Plus strand |
| Position |
NVQA01000001.1 : 17696810 - 17706959 |
RNA binding domain |
PWI |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSOMEP00000012648 |
PWI |
PF01480 |
5.4e-30 |
1 |
| ENSOMEP00000030017 |
PWI |
PF01480 |
1.7e-13 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| srrm1-201 |
ENSOMET00000020046 |
2481 |
826aa |
ENSOMEP00000012648 |
| srrm1-202 |
ENSOMET00000020029 |
318 |
105aa |
ENSOMEP00000030017 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOMEG00000014110 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 82.9298 | 78.0872 | xiphophorus_maculatus | ENSXMAP00000034250 | 79.4664 | 74.826 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 78.6925 | 73.0024 | poecilia_reticulata | ENSPREP00000003793 | 77.4732 | 71.8713 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 75.4237 | 69.2494 | haplochromis_burtoni | ENSHBUP00000033450 | 79.4643 | 72.9592 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.8354 | 79.4189 | oreochromis_niloticus | ENSONIP00000010331 | 81.7762 | 75.6632 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 73.9709 | 69.1283 | cyclopterus_lumpus | ENSCLMP00005006083 | 78.9406 | 73.7726 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 83.0508 | 77.2397 | sparus_aurata | ENSSAUP00010036820 | 78.6697 | 73.1651 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 86.0775 | 80.8717 | amphiprion_ocellaris | ENSAOCP00000016773 | 82.4826 | 77.4942 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 82.0823 | 75.1816 | takifugu_rubripes | ENSTRUP00000005845 | 79.4842 | 72.8019 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 86.3196 | 81.1138 | acanthochromis_polyacanthus | ENSAPOP00000000050 | 82.5231 | 77.5463 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.7143 | 79.1768 | mastacembelus_armatus | ENSMAMP00000015180 | 82.0394 | 75.7822 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 81.9613 | 76.2712 | cynoglossus_semilaevis | ENSCSEP00000000132 | 79.4601 | 73.9437 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 84.2615 | 79.2978 | labrus_bergylta | ENSLBEP00000018116 | 80.8362 | 76.0743 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 83.293 | 77.6029 | nothobranchius_furzeri | ENSNFUP00015031083 | 80 | 74.5349 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 77.9661 | 72.0339 | tetraodon_nigroviridis | ENSTNIP00000020027 | 78.2503 | 72.2965 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 71.6707 | 67.0702 | betta_splendens | ENSBSLP00000036607 | 85.3026 | 79.8271 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 76.6344 | 71.5496 | lates_calcarifer | ENSLCAP00010025293 | 79.9242 | 74.6212 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 82.4455 | 77.6029 | poecilia_formosa | ENSPFOP00000003771 | 79.0941 | 74.4483 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 82.6877 | 77.4818 | poecilia_formosa | ENSPFOP00000022512 | 78.5057 | 73.5632 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 86.1985 | 80.6295 | stegastes_partitus | ENSSPAP00000012517 | 82.4074 | 77.0833 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.8354 | 81.477 | dicentrarchus_labrax | ENSDLAP00005001422 | 82.1553 | 77.9838 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 84.6247 | 79.0557 | cottoperca_gobio | ENSCGOP00000039106 | 81.3737 | 76.0186 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 82.3245 | 74.8184 | hippocampus_comes | ENSHCOP00000010258 | 82.0265 | 74.5476 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.8354 | 81.3559 | seriola_dumerili | ENSSDUP00000017738 | 82.1553 | 77.8679 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 75.908 | 70.5811 | gasterosteus_aculeatus | ENSGACP00000009631 | 72.6535 | 67.555 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 83.6562 | 79.0557 | sander_lucioperca | ENSSLUP00000004648 | 80.5361 | 76.1072 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.9564 | 85.109 | oryzias_javanicus | ENSOJAP00000042586 | 91.6129 | 90.7097 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 77.845 | 72.276 | poecilia_latipinna | ENSPLAP00000022314 | 79.9751 | 74.2537 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 77.845 | 72.276 | poecilia_latipinna | ENSPLAP00000019705 | 79.9751 | 74.2537 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.7143 | 80.2663 | amphiprion_percula | ENSAPEP00000026669 | 82.1346 | 76.9142 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.3511 | 79.0557 | anabas_testudineus | ENSATEP00000010911 | 81.9767 | 75.9302 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 84.8668 | 80.1453 | larimichthys_crocea | ENSLCRP00005043937 | 81.2283 | 76.7092 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 65.3753 | 61.9855 | scophthalmus_maximus | ENSSMAP00000015213 | 84.375 | 80 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 85.8354 | 81.477 | seriola_lalandi_dorsalis | ENSSLDP00000016091 | 82.0602 | 77.8935 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 37.7724 | 26.5133 | caenorhabditis_elegans | F28D9.1.1 | 51.9135 | 36.4393 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 67.4334 | 59.8063 | danio_rerio | ENSDARP00000124762 | 62.1652 | 55.1339 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 68.4019 | 60.8959 | carassius_auratus | ENSCARP00000114160 | 62.9176 | 56.0134 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 70.5811 | 63.5593 | carassius_auratus | ENSCARP00000127567 | 57.4951 | 51.7751 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 67.7966 | 60.7748 | ictalurus_punctatus | ENSIPUP00000024898 | 69.9126 | 62.6717 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 67.1913 | 59.8063 | electrophorus_electricus | ENSEEEP00000044397 | 71.5206 | 63.6598 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 73.3656 | 65.6174 | esox_lucius | ENSELUP00000002003 | 72.0571 | 64.4471 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 76.0291 | 68.4019 | oncorhynchus_mykiss | ENSOMYP00000069296 | 73.1083 | 65.7742 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 77.845 | 69.7337 | oncorhynchus_mykiss | ENSOMYP00000094307 | 73.908 | 66.2069 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 76.8765 | 68.4019 | oncorhynchus_kisutch | ENSOKIP00005100195 | 73.5805 | 65.4693 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 75.3027 | 68.0387 | oncorhynchus_kisutch | ENSOKIP00005052861 | 71.9907 | 65.0463 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 71.9128 | 64.891 | salmo_salar | ENSSSAP00000072989 | 72.2628 | 65.2068 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 77.2397 | 69.4915 | salmo_salar | ENSSSAP00000006782 | 72.6651 | 65.3759 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 73.7288 | 66.3438 | salmo_trutta | ENSSTUP00000051412 | 71.9858 | 64.7754 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 74.3341 | 66.707 | salmo_trutta | ENSSTUP00000110134 | 64.6997 | 58.0611 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 53.2688 | 41.8886 | pan_troglodytes | ENSPTRP00000067759 | 59.5399 | 46.82 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 54.3584 | 42.4939 | pan_paniscus | ENSPPAP00000027369 | 58.3875 | 45.6437 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 47.6998 | 39.9516 | ochotona_princeps | ENSOPRP00000012061 | 44.22 | 37.037 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 61.9855 | 54.9637 | pygocentrus_nattereri | ENSPNAP00000018511 | 68.4492 | 60.6952 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 74.4552 | 65.7385 | scleropages_formosus | ENSSFOP00015037720 | 71.0162 | 62.7021 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 72.0339 | 62.8329 | paramormyrops_kingsleyae | ENSPKIP00000025372 | 67.7677 | 59.1116 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 77.4818 | 69.6126 | hucho_hucho | ENSHHUP00000063760 | 67.086 | 60.2725 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 76.7554 | 69.1283 | hucho_hucho | ENSHHUP00000043751 | 72.3744 | 65.1826 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 74.3341 | 66.1017 | denticeps_clupeoides | ENSDCDP00000046977 | 72.3204 | 64.311 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 70.9443 | 63.6804 | sinocyclocheilus_grahami | ENSSGRP00000029666 | 61.945 | 55.6025 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 67.7966 | 60.1695 | sinocyclocheilus_grahami | ENSSGRP00000051691 | 63.854 | 56.6705 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 83.0508 | 77.1186 | myripristis_murdjan | ENSMMDP00005045449 | 84.6914 | 78.642 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 71.4286 | 63.6804 | cyprinus_carpio_carpio | ENSCCRP00000011485 | 62.6327 | 55.8386 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 71.4286 | 64.2857 | cyprinus_carpio_carpio | ENSCCRP00000011495 | 63.7838 | 57.4054 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 70.9443 | 64.4068 | oncorhynchus_tshawytscha | ENSOTSP00005021998 | 70.8585 | 64.3289 |
| ENSOMEG00000014110 | oryzias_melastigma | ENSOMEP00000012648 | 77.845 | 69.7337 | oncorhynchus_tshawytscha | ENSOTSP00005002498 | 73.908 | 66.2069 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
