RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSOMEG00000008184	Gene ID	112136827	Accession	-
Symbol	zgc	Alias	-	Full Name	mitochondrial ribosomal protein L55
Status	Confidence	Length	5405 bases	Strand	Plus strand
Position	NVQA01000035.1 : 5263144 - 5268548	RNA binding domain	Mitoc_L55
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOMEP00000026395	Mitoc_L55	PF09776	3.9e-38	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
zgc:171480-201	ENSOMET00000004675	2406	137aa	ENSOMEP00000026395

Gene Model

Click here to download ENSOMEG00000008184's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOMEG00000008184's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOMEG00000008184

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	67.8832	49.635	fundulus_heteroclitus	ENSFHEP00000007068	66.9065	48.9209
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	69.3431	54.7445	xiphophorus_maculatus	ENSXMAP00000007955	67.8571	53.5714
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	83.9416	81.0219	oryzias_latipes	ENSORLP00000038678	47.3251	45.679
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	70.8029	55.4745	poecilia_reticulata	ENSPREP00000030014	69.2857	54.2857
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	65.6934	53.2847	haplochromis_burtoni	ENSHBUP00000025734	65.2174	52.8986
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	50.365	oreochromis_niloticus	ENSONIP00000051454	65.9091	52.2727
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	65.6934	53.2847	astatotilapia_calliptera	ENSACLP00000007621	65.2174	52.8986
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	68.6131	51.8248	cyclopterus_lumpus	ENSCLMP00005043246	63.5135	47.973
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	64.9635	50.365	sparus_aurata	ENSSAUP00010056568	64.0288	49.6403
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	64.2336	51.8248	neolamprologus_brichardi	ENSNBRP00000025436	63.7681	51.4493
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	68.6131	56.9343	amphiprion_ocellaris	ENSAOCP00000011798	65.2778	54.1667
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	65.6934	53.2847	takifugu_rubripes	ENSTRUP00000063941	66.6667	54.0741
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	68.6131	54.7445	amphilophus_citrinellus	ENSACIP00000002022	69.1176	55.1471
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	68.6131	53.2847	kryptolebias_marmoratus	ENSKMAP00000002615	74.0157	57.4803
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	67.8832	56.2044	acanthochromis_polyacanthus	ENSAPOP00000001578	64.5833	53.4722
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	68.6131	56.9343	mastacembelus_armatus	ENSMAMP00000033065	63.9456	53.0612
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	61.3139	45.2555	cynoglossus_semilaevis	ENSCSEP00000030500	60.4317	44.6043
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	65.6934	55.4745	labrus_bergylta	ENSLBEP00000020947	71.4286	60.3175
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	65.6934	55.4745	labrus_bergylta	ENSLBEP00000014049	71.4286	60.3175
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	65.6934	53.2847	maylandia_zebra	ENSMZEP00005020768	65.2174	52.8986
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	48.1752	nothobranchius_furzeri	ENSNFUP00015047503	69.0476	52.381
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	70.8029	54.7445	betta_splendens	ENSBSLP00000026358	65.1007	50.3356
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	72.9927	59.1241	lates_calcarifer	ENSLCAP00010017513	69.4444	56.25
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	70.8029	54.7445	poecilia_formosa	ENSPFOP00000012701	69.2857	53.5714
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	67.8832	55.4745	stegastes_partitus	ENSSPAP00000015381	65.9574	53.9007
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	65.6934	52.5547	dicentrarchus_labrax	ENSDLAP00005075336	63.3803	50.7042
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	48.9051	cottoperca_gobio	ENSCGOP00000033214	51.4793	39.645
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	51.0949	hippocampus_comes	ENSHCOP00000018735	47.8022	38.4615
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	70.8029	54.7445	seriola_dumerili	ENSSDUP00000031367	65.9864	51.0204
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	57.6642	48.9051	gasterosteus_aculeatus	ENSGACP00000002772	85.8696	72.8261
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	67.1533	55.4745	sander_lucioperca	ENSSLUP00000048446	63.0137	52.0548
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	92.7007	89.781	oryzias_javanicus	ENSOJAP00000022955	92.7007	89.781
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	69.3431	56.9343	amphiprion_percula	ENSAPEP00000031438	65.9722	54.1667
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	68.6131	51.0949	anabas_testudineus	ENSATEP00000065671	63.9456	47.619
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	67.8832	55.4745	larimichthys_crocea	ENSLCRP00005005552	67.3913	55.0725
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	85.4015	81.7518	oryzias_sinensis	ENSOSIP00000038589	48.3471	46.281
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	64.9635	56.9343	oryzias_sinensis	ENSOSIP00000008730	57.0513	50
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	64.2336	55.4745	oryzias_sinensis	ENSOSIP00000022998	36.0656	31.1475
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	67.1533	51.0949	scophthalmus_maximus	ENSSMAP00000008784	67.6471	51.4706
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	70.073	54.0146	seriola_lalandi_dorsalis	ENSSLDP00000025170	65.3061	50.3401
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	48.1752	32.8467	petromyzon_marinus	ENSPMAP00000000948	56.4103	38.4615
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	56.9343	41.6058	callorhinchus_milii	ENSCMIP00000047195	66.6667	48.7179
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	62.0438	42.3358	latimeria_chalumnae	ENSLACP00000018490	64.3939	43.9394
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.1241	43.7956	clupea_harengus	ENSCHAP00000019020	48.7952	36.1446
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	43.7956	danio_rerio	ENSDARP00000063716	65.4135	45.1128
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	62.0438	46.7153	carassius_auratus	ENSCARP00000097311	64.8855	48.855
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	46.7153	astyanax_mexicanus	ENSAMXP00000042490	66.4122	48.855
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	62.7737	45.2555	ictalurus_punctatus	ENSIPUP00000001783	65.1515	46.9697
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	62.7737	45.2555	electrophorus_electricus	ENSEEEP00000003202	65.1515	46.9697
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	58.3942	42.3358	esox_lucius	ENSELUP00000062815	61.0687	44.2748
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	60.5839	44.5255	oncorhynchus_mykiss	ENSOMYP00000060747	63.3588	46.5649
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	51.0949	32.8467	salmo_salar	ENSSSAP00000070828	43.75	28.125
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.854	42.3358	salmo_salar	ENSSSAP00000118002	65.0794	46.0317
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.854	41.6058	salmo_trutta	ENSSTUP00000045734	65.6	45.6
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.854	40.8759	salmo_trutta	ENSSTUP00000092916	60.7407	41.4815
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	64.2336	54.0146	gadus_morhua	ENSGMOP00000020432	61.5385	51.7483
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	42.3358	xenopus_tropicalis	ENSXETP00000105135	64.9254	43.2836
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.854	45.9854	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	50.8064
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	54.7445	35.0365	crocodylus_porosus	ENSCPRP00005003439	60	38.4
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	56.2044	40.146	sphenodon_punctatus	ENSSPUP00000000902	61.6	44
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	54.7445	40.146	laticauda_laticaudata	ENSLLTP00000015769	59.5238	43.6508
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	53.2847	37.9562	notechis_scutatus	ENSNSUP00000020160	57.9365	41.2698
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	53.2847	38.6861	pseudonaja_textilis	ENSPTXP00000013853	57.9365	42.0635
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	53.2847	33.5766	anas_platyrhynchos_platyrhynchos	ENSAPLP00000025398	16.3677	10.3139
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	49.635	32.8467	gallus_gallus	ENSGALP00010039229	31.7757	21.028
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	51.0949	35.7664	meleagris_gallopavo	ENSMGAP00000023585	46.3576	32.4503
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	48.1752	31.3869	serinus_canaria	ENSSCAP00000007950	51.5625	33.5938
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	48.9051	31.3869	parus_major	ENSPMJP00000004622	52.7559	33.8583
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	56.2044	38.6861	ornithorhynchus_anatinus	ENSOANP00000036876	64.1667	44.1667
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	60.5839	45.2555	pelodiscus_sinensis	ENSPSIP00000012059	66.4	49.6
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	60.5839	41.6058	erpetoichthys_calabaricus	ENSECRP00000014262	62.8788	43.1818
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	49.635	31.3869	erpetoichthys_calabaricus	ENSECRP00000031419	59.6491	37.7193
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	48.9051	32.8467	anser_brachyrhynchus	ENSABRP00000002898	53.1746	35.7143
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	56.2044	40.146	phascolarctos_cinereus	ENSPCIP00000029360	61.1111	43.6508
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	62.0438	45.9854	pygocentrus_nattereri	ENSPNAP00000030534	64.3939	47.7273
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	48.9051	33.5766	coturnix_japonica	ENSCJPP00005012391	59.292	40.708
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	58.3942	40.8759	salvator_merianae	ENSSMRP00000021759	62.9921	44.0945
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	62.0438	45.9854	terrapene_carolina_triunguis	ENSTMTP00000010935	68	50.4
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.854	40.8759	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	42.1053
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	50.365	37.9562	podarcis_muralis	ENSPMRP00000026840	44.2308	33.3333
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	53.2847	40.146	podarcis_muralis	ENSPMRP00000026800	58.4	44
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	60.5839	45.2555	gopherus_evgoodei	ENSGEVP00005017233	66.4	49.6
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	56.9343	44.5255	paramormyrops_kingsleyae	ENSPKIP00000022947	60.4651	47.2868
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	58.3942	41.6058	chelonoidis_abingdonii	ENSCABP00000020107	64.5161	45.9677
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	51.0949	35.7664	aquila_chrysaetos_chrysaetos	ENSACCP00020020258	58.8235	41.1765
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	60.5839	42.3358	hucho_hucho	ENSHHUP00000086054	63.3588	44.2748
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	56.9343	43.7956	denticeps_clupeoides	ENSDCDP00000009095	56.1151	43.1655
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	49.635	33.5766	strigops_habroptila	ENSSHBP00005003978	27.3092	18.4739
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	55.4745	40.146	naja_naja	ENSNNAP00000013455	46.3415	33.5366
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.854	44.5255	sinocyclocheilus_grahami	ENSSGRP00000009619	67.2131	50
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	60.5839	45.2555	sinocyclocheilus_grahami	ENSSGRP00000006068	72.1739	53.913
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	67.8832	54.0146	myripristis_murdjan	ENSMMDP00005006023	64.5833	51.3889
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	48.1752	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	43.7086
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	63.5037	47.4453	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	48.8722
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	59.854	44.5255	oncorhynchus_tshawytscha	ENSOTSP00005049253	62.5954	46.5649
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	42.3358	29.927	ficedula_albicollis	ENSFALP00000001120	36.478	25.7862
ENSOMEG00000008184	oryzias_melastigma	ENSOMEP00000026395	45.9854	32.1168	ficedula_albicollis	ENSFALP00000026801	52.5	36.6667

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression