RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSOMEG00000007133	Gene ID	112142221	Accession	-
Symbol		Alias	-	Full Name	leucine-rich repeat flightless-interacting protein 2-like
Status	Confidence	Length	20979 bases	Strand	Plus strand
Position	NVQA01008387.1 : 132461 - 153439	RNA binding domain	LRRFIP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOMEP00000006017	LRRFIP	PF09738	9.9e-90	1
ENSOMEP00000006034	LRRFIP	PF09738	4.8e-89	1
ENSOMEP00000006051	LRRFIP	PF09738	1.6e-78	1
ENSOMEP00000006051	LRRFIP	PF09738	1.6e-78	2
ENSOMEP00000025726	LRRFIP	PF09738	5.9e-74	1
ENSOMEP00000025726	LRRFIP	PF09738	5.9e-74	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSOMET00000006400	4323	556aa	ENSOMEP00000025726
-	ENSOMET00000006454	4212	519aa	ENSOMEP00000006051
-	ENSOMET00000006488	3948	431aa	ENSOMEP00000006034
-	ENSOMET00000006516	3912	419aa	ENSOMEP00000006017

Gene Model

Click here to download ENSOMEG00000007133's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOMEG00000007133's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000011941	63.4868	45.8882	oryzias_melastigma	ENSOMEP00000025726	69.4245	50.1799
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000016710	22.719	13.8686	oryzias_melastigma	ENSOMEP00000025726	44.7842	27.3381
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000015762	67.8038	49.0405	oryzias_melastigma	ENSOMEP00000025726	57.1942	41.3669

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	16.187	14.9281	fundulus_heteroclitus	ENSFHEP00000021314	85.7143	79.0476
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	17.2662	15.2878	xiphophorus_maculatus	ENSXMAP00000030214	91.4286	80.9524
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	18.1655	17.446	oryzias_latipes	ENSORLP00000027635	99.0196	95.098
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	17.2662	15.2878	poecilia_reticulata	ENSPREP00000010110	91.4286	80.9524
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	83.813	74.4604	oreochromis_niloticus	ENSONIP00000024140	85.9779	76.3838
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	24.8201	21.0432	sparus_aurata	ENSSAUP00010067446	41.0714	34.8214
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	16.7266	15.2878	neolamprologus_brichardi	ENSNBRP00000015581	92.0792	84.1584
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	77.8777	68.1655	amphiprion_ocellaris	ENSAOCP00000023418	86.0835	75.3479
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	13.3094	12.0504	amphilophus_citrinellus	ENSACIP00000008702	86.0465	77.907
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	14.2086	11.5108	kryptolebias_marmoratus	ENSKMAP00000022544	65.2893	52.8926
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	18.705	16.187	acanthochromis_polyacanthus	ENSAPOP00000025267	73.7589	63.8298
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	54.6763	46.7626	mastacembelus_armatus	ENSMAMP00000033703	80	68.4211
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	17.9856	16.187	maylandia_zebra	ENSMZEP00005018482	93.4579	84.1122
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	16.5468	13.6691	nothobranchius_furzeri	ENSNFUP00015023988	88.4615	73.0769
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	82.1942	67.9856	betta_splendens	ENSBSLP00000019726	82.9401	68.6025
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	85.9712	75.5396	lates_calcarifer	ENSLCAP00010057368	84.3034	74.0741
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	17.9856	16.187	pundamilia_nyererei	ENSPNYP00000020204	93.4579	84.1122
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	68.1655	60.0719	poecilia_formosa	ENSPFOP00000005635	82.7511	72.9258
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	18.3453	15.4676	stegastes_partitus	ENSSPAP00000000906	95.3271	80.3738
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	19.6043	16.187	hippocampus_comes	ENSHCOP00000001648	80.7407	66.6667
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	58.0935	49.8201	gasterosteus_aculeatus	ENSGACP00000020450	81.5657	69.9495
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	17.9856	15.8273	sander_lucioperca	ENSSLUP00000003686	93.4579	82.243
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	17.446	16.7266	oryzias_javanicus	ENSOJAP00000017904	91.5094	87.7358
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	13.3094	12.7698	oryzias_javanicus	ENSOJAP00000017918	55.2239	52.9851
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	77.8777	67.8058	amphiprion_percula	ENSAPEP00000010527	86.0835	74.9503
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	17.8058	15.6475	larimichthys_crocea	ENSLCRP00005031412	92.5234	81.3084
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	10.2518	9.89209	oryzias_sinensis	ENSOSIP00000003377	66.2791	63.9535
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	52.8777	45.5036	scophthalmus_maximus	ENSSMAP00000068510	78.1915	67.2872
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	80.2158	68.8849	seriola_lalandi_dorsalis	ENSSLDP00000011889	86.2669	74.0812
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	33.0935	19.6043	caenorhabditis_elegans	F57B9.7b.1	49.3298	29.2225
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	38.8489	26.259	drosophila_melanogaster	FBpp0312008	54.5455	36.8687
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	43.8849	27.518	ciona_intestinalis	ENSCINP00000024071	56.2212	35.2535
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	45.1439	31.1151	petromyzon_marinus	ENSPMAP00000010547	53.2909	36.7304
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	67.0863	50.3597	latimeria_chalumnae	ENSLACP00000010642	71.869	53.9499
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	77.8777	63.1295	lepisosteus_oculatus	ENSLOCP00000005986	64.2433	52.0772
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.8417	59.1727	clupea_harengus	ENSCHAP00000027088	80.0395	65.0198
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.8417	58.9928	danio_rerio	ENSDARP00000137539	77.2901	62.5954
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	76.7986	61.8705	carassius_auratus	ENSCARP00000022806	74.6504	60.1399
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	77.3381	63.1295	carassius_auratus	ENSCARP00000003020	71.4286	58.3056
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	70.8633	58.4532	astyanax_mexicanus	ENSAMXP00000013856	76.8031	63.3528
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	19.2446	16.0072	electrophorus_electricus	ENSEEEP00000038895	81.0606	67.4242
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	75.8993	61.3309	oncorhynchus_mykiss	ENSOMYP00000012726	82.1012	66.3424
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	73.2014	59.1727	oncorhynchus_mykiss	ENSOMYP00000013236	81.7269	66.0643
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	80.9352	65.8273	oncorhynchus_kisutch	ENSOKIP00005100786	82.4176	67.033
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	77.518	63.3094	oncorhynchus_kisutch	ENSOKIP00005116126	82.2519	67.1756
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	71.0432	57.0144	salmo_salar	ENSSSAP00000056108	80.9426	64.959
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	81.4748	65.8273	salmo_trutta	ENSSTUP00000060885	73.539	59.4156
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	18.3453	15.6475	salmo_trutta	ENSSTUP00000093752	95.3271	81.3084
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	65.8273	52.3381	gadus_morhua	ENSGMOP00000045892	49.5264	39.3775
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	63.6691	47.1223	xenopus_tropicalis	ENSXETP00000070787	32.1526	23.7965
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	69.2446	54.3165	crocodylus_porosus	ENSCPRP00005008836	56.0408	43.9592
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	57.1942	44.4245	sphenodon_punctatus	ENSSPUP00000020081	75.7143	58.8095
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	16.3669	13.6691	ursus_americanus	ENSUAMP00000009316	85.8491	71.6981
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	73.3813	57.1942	mustela_putorius_furo	ENSMPUP00000000077	60.8048	47.392
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	75.5396	59.5324	homo_sapiens	ENSP00000310109	65.625	51.7188
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	70.1439	54.4964	panthera_pardus	ENSPPRP00000011443	60.9375	47.3438
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	74.4604	57.554	physeter_catodon	ENSPCTP00005012117	61.8834	47.8326
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	57.3741	44.0647	loxodonta_africana	ENSLAFP00000013236	59.6262	45.7944
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	75.5396	58.2734	equus_asinus	ENSEASP00005010357	65.8307	50.7837
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	54.1367	41.3669	capra_hircus	ENSCHIP00000002781	73.236	55.9611
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	74.8201	58.813	urocitellus_parryii	ENSUPAP00010026733	60.7299	47.7372
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	57.7338	44.6043	cricetulus_griseus_chok1gshd	ENSCGRP00001027729	58.6837	45.3382
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	71.0432	55.5755	dipodomys_ordii	ENSDORP00000019667	61.8153	48.3568
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.482	56.4748	mesocricetus_auratus	ENSMAUP00000006054	60.7843	47.3605
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.482	55.2158	cavia_porcellus	ENSCPOP00000006108	62.0955	47.3035
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	71.5827	56.6547	pelodiscus_sinensis	ENSPSIP00000019004	61.4198	48.6111
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	65.8273	50.7194	monodelphis_domestica	ENSMODP00000052259	72.1893	55.6213
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	57.1942	45.3237	erpetoichthys_calabaricus	ENSECRP00000026297	71.6216	56.7568
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	56.1151	42.2662	vombatus_ursinus	ENSVURP00010029168	74.2857	55.9524
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	75.5396	60.0719	microcebus_murinus	ENSMICP00000021671	65.0155	51.7028
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	61.6906	46.9424	anser_brachyrhynchus	ENSABRP00000026547	59.2401	45.0777
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	14.2086	9.89209	ciona_savignyi	ENSCSAVP00000008861	71.8182	50
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	8.09352	4.31655	ciona_savignyi	ENSCSAVP00000008871	51.7241	27.5862
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	78.2374	64.0288	pygocentrus_nattereri	ENSPNAP00000002855	72.3794	59.2346
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.482	56.1151	nannospalax_galili	ENSNGAP00000007867	60.8761	47.1299
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.3022	55.9353	ictidomys_tridecemlineatus	ENSSTOP00000021553	60.7251	46.9789
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.8417	56.8345	chlorocebus_sabaeus	ENSCSAP00000002404	65.9609	51.4658
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.1223	56.8345	otolemur_garnettii	ENSOGAP00000011646	60.3916	47.5904
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	74.2806	57.3741	moschus_moschiferus	ENSMMSP00000008243	64.5312	49.8438
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	71.4029	55.7554	leptobrachium_leishanense	ENSLLEP00000020743	62.916	49.1284
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	67.446	50.8993	scleropages_formosus	ENSSFOP00015049492	66.3717	50.0885
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	70.5036	54.8561	chinchilla_lanigera	ENSCLAP00000003117	61.25	47.6562
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	75.3597	59.7122	propithecus_coquereli	ENSPCOP00000024042	65.3666	51.7941
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	59.8921	45.3237	carlito_syrichta	ENSTSYP00000023563	62.3596	47.191
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	15.8273	13.3094	carlito_syrichta	ENSTSYP00000021508	87.1287	73.2673
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	18.3453	15.6475	hucho_hucho	ENSHHUP00000027907	95.3271	81.3084
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	18.3453	15.6475	hucho_hucho	ENSHHUP00000063849	95.3271	81.3084
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	77.6978	62.5899	denticeps_clupeoides	ENSDCDP00000062977	79.7048	64.2066
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.1223	55.9353	peromyscus_maniculatus_bairdii	ENSPEMP00000029486	60.574	46.9789
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	52.518	42.2662	sinocyclocheilus_grahami	ENSSGRP00000027696	73	58.75
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	21.5827	16.9065	sinocyclocheilus_grahami	ENSSGRP00000092457	85.1064	66.6667
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	18.3453	16.187	myripristis_murdjan	ENSMMDP00005048859	84.2975	74.3802
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	78.4173	62.5899	cyprinus_carpio_carpio	ENSCCRP00000172865	72.4252	57.8073
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	77.518	62.9496	cyprinus_carpio_carpio	ENSCCRP00000174883	71.5947	58.1395
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	75.7194	59.8921	prolemur_simus	ENSPSMP00000006232	65.8842	52.1127
ENSOMEG00000007133	oryzias_melastigma	ENSOMEP00000025726	72.3022	56.295	microtus_ochrogaster	ENSMOCP00000019678	60.6335	47.2097

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression