| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSOKIG00005006322 | Gene ID |
109867084 |
Accession |
- |
| Symbol |
polr3b |
Alias |
- |
Full Name |
RNA polymerase III subunit B |
| Status |
Confidence |
Length |
53558 bases |
Strand |
Minus strand |
| Position |
LG22 : 37822099 - 37875656 |
RNA binding domain |
RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSOKIP00005014729 |
RNA_pol_Rpb2_1 |
PF04563 |
3.2e-52 |
1 |
| ENSOKIP00005014729 |
RNA_pol_Rpb2_3 |
PF04565 |
2.1e-19 |
2 |
| ENSOKIP00005014729 |
RNA_pol_Rpb2_7 |
PF04560 |
3.1e-34 |
3 |
| ENSOKIP00005014729 |
RNA_pol_Rpb2_2 |
PF04561 |
4.6e-25 |
4 |
| ENSOKIP00005014729 |
RNA_pol_Rpb2_6 |
PF00562 |
2.8e-126 |
5 |
| ENSOKIP00005014729 |
RNA_pol_Rpb2_4 |
PF04566 |
8.3e-24 |
6 |
| ENSOKIP00005014729 |
RNA_pol_Rpb2_5 |
PF04567 |
2e-06 |
7 |
| ENSOKIP00005014699 |
RNA_pol_Rpb2_1 |
PF04563 |
3.2e-52 |
1 |
| ENSOKIP00005014699 |
RNA_pol_Rpb2_3 |
PF04565 |
2.1e-19 |
2 |
| ENSOKIP00005014699 |
RNA_pol_Rpb2_7 |
PF04560 |
3.4e-34 |
3 |
| ENSOKIP00005014699 |
RNA_pol_Rpb2_2 |
PF04561 |
4.7e-25 |
4 |
| ENSOKIP00005014699 |
RNA_pol_Rpb2_6 |
PF00562 |
2.9e-126 |
5 |
| ENSOKIP00005014699 |
RNA_pol_Rpb2_4 |
PF04566 |
8.4e-24 |
6 |
| ENSOKIP00005014699 |
RNA_pol_Rpb2_5 |
PF04567 |
2.1e-06 |
7 |
| ENSOKIP00005014794 |
RNA_pol_Rpb2_1 |
PF04563 |
4.6e-44 |
1 |
| ENSOKIP00005014794 |
RNA_pol_Rpb2_3 |
PF04565 |
2e-19 |
2 |
| ENSOKIP00005014794 |
RNA_pol_Rpb2_7 |
PF04560 |
3.4e-34 |
3 |
| ENSOKIP00005014794 |
RNA_pol_Rpb2_2 |
PF04561 |
4.5e-25 |
4 |
| ENSOKIP00005014794 |
RNA_pol_Rpb2_6 |
PF00562 |
2.7e-126 |
5 |
| ENSOKIP00005014794 |
RNA_pol_Rpb2_4 |
PF04566 |
8.2e-24 |
6 |
| ENSOKIP00005014794 |
RNA_pol_Rpb2_5 |
PF04567 |
1.9e-06 |
7 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSOKIT00005015647 |
4000 |
1132aa |
ENSOKIP00005014699 |
| - |
ENSOKIT00005015678 |
3967 |
1121aa |
ENSOKIP00005014729 |
| - |
ENSOKIT00005015743 |
3721 |
1097aa |
ENSOKIP00005014794 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005031227 | 78.1132 | 72.4528 | oncorhynchus_kisutch | ENSOKIP00005014699 | 18.2862 | 16.9611 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005065624 | 54.3041 | 35.6396 | oncorhynchus_kisutch | ENSOKIP00005014699 | 59.629 | 39.1343 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005029133 | 53.4225 | 35.0905 | oncorhynchus_kisutch | ENSOKIP00005014699 | 59.9823 | 39.3993 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005017409 | 44.8854 | 29.1005 | oncorhynchus_kisutch | ENSOKIP00005014699 | 44.9647 | 29.1519 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 79.682 | 63.6042 | caenorhabditis_elegans | F09F7.3.1 | 78.1629 | 62.3917 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 81.9788 | 67.4912 | drosophila_melanogaster | FBpp0087085 | 81.6183 | 67.1944 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 20.7597 | 17.7562 | ciona_intestinalis | ENSCINP00000014455 | 85.4545 | 73.0909 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 13.2509 | 11.6608 | ciona_intestinalis | ENSCINP00000031423 | 84.2697 | 74.1573 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 10.689 | 9.4523 | ciona_intestinalis | ENSCINP00000032097 | 89.6296 | 79.2593 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 15.8127 | 14.576 | ciona_intestinalis | ENSCINP00000014454 | 87.3171 | 80.4878 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 20.1413 | 18.4629 | petromyzon_marinus | ENSPMAP00000002282 | 91.2 | 83.6 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.0848 | 94.788 | lepisosteus_oculatus | ENSLOCP00000018771 | 97.0848 | 94.788 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.5265 | 94.2579 | clupea_harengus | ENSCHAP00000012595 | 97.7857 | 94.5084 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.5866 | 95.9364 | danio_rerio | ENSDARP00000085899 | 98.7611 | 96.1062 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.3216 | 96.3781 | carassius_auratus | ENSCARP00000009113 | 98.4956 | 96.5487 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.0565 | 94.788 | astyanax_mexicanus | ENSAMXP00000020759 | 97.5395 | 94.2882 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.9682 | 95.1413 | ictalurus_punctatus | ENSIPUP00000024931 | 97.9682 | 95.1413 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 94.6996 | 91.4311 | electrophorus_electricus | ENSEEEP00000008336 | 96.9259 | 93.5805 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 100 | 100 | oncorhynchus_mykiss | ENSOMYP00000014455 | 100 | 100 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 99.3816 | 98.4982 | esox_lucius | ENSELUP00000025210 | 99.3816 | 98.4982 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 96.9081 | 94.2579 | cyclopterus_lumpus | ENSCLMP00005022170 | 97.9464 | 95.2679 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.7633 | 96.2014 | lates_calcarifer | ENSLCAP00010033472 | 98.7633 | 96.2014 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 99.9117 | 99.8233 | salmo_salar | ENSSSAP00000092385 | 99.9117 | 99.8233 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 16.0777 | 14.4876 | salmo_salar | ENSSSAP00000109359 | 60.4651 | 54.4851 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 20.1413 | 18.5512 | salmo_salar | ENSSSAP00000109374 | 78.6207 | 72.4138 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4099 | 95.2297 | astatotilapia_calliptera | ENSACLP00000040472 | 98.4099 | 95.2297 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 86.5724 | 81.8905 | fundulus_heteroclitus | ENSFHEP00000007090 | 93.5115 | 88.4542 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 27.7385 | 26.9435 | haplochromis_burtoni | ENSHBUP00000007384 | 95.7317 | 92.9878 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.6749 | 96.3781 | seriola_dumerili | ENSSDUP00000025847 | 98.6749 | 96.3781 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4982 | 94.9647 | oryzias_latipes | ENSORLP00000013878 | 97.9789 | 94.464 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.7633 | 95.6714 | poecilia_formosa | ENSPFOP00000016576 | 98.7633 | 95.6714 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 14.311 | 13.1625 | salmo_trutta | ENSSTUP00000114077 | 67.5 | 62.0833 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 99.9117 | 99.9117 | salmo_trutta | ENSSTUP00000019001 | 99.9117 | 99.9117 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 96.4664 | 93.2862 | gadus_morhua | ENSGMOP00000054019 | 95.4545 | 92.3077 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4099 | 94.8763 | cyprinodon_variegatus | ENSCVAP00000023310 | 98.4099 | 94.8763 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.3216 | 95.4064 | pygocentrus_nattereri | ENSPNAP00000031547 | 98.3216 | 95.4064 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 94.9647 | 91.7845 | neolamprologus_brichardi | ENSNBRP00000004351 | 97.5499 | 94.2831 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 75.4417 | 72.5265 | oryzias_sinensis | ENSOSIP00000041367 | 93.4354 | 89.8249 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.5866 | 95.6714 | amphiprion_ocellaris | ENSAOCP00000006864 | 98.5866 | 95.6714 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 96.8198 | 94.3463 | cottoperca_gobio | ENSCGOP00000015510 | 94.6459 | 92.228 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.3498 | 93.3746 | erpetoichthys_calabaricus | ENSECRP00000009090 | 97.3498 | 93.3746 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.3216 | 95.583 | gasterosteus_aculeatus | ENSGACP00000015639 | 98.3216 | 95.583 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4099 | 95.583 | acanthochromis_polyacanthus | ENSAPOP00000015290 | 98.4099 | 95.583 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 76.6784 | 62.0141 | saccharomyces_cerevisiae | YOR207C | 75.544 | 61.0966 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.3216 | 94.788 | kryptolebias_marmoratus | ENSKMAP00000006782 | 98.3216 | 94.788 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.2615 | 94.6996 | mastacembelus_armatus | ENSMAMP00000009395 | 97.4336 | 94.8673 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.9682 | 94.1696 | hippocampus_comes | ENSHCOP00000005127 | 97.7093 | 93.9207 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.6148 | 94.523 | amphilophus_citrinellus | ENSACIP00000007576 | 98.5727 | 95.4505 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 89.1343 | 85.9541 | amphiprion_percula | ENSAPEP00000009613 | 95.2786 | 91.8791 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 94.9647 | 92.2262 | cynoglossus_semilaevis | ENSCSEP00000009251 | 94.6303 | 91.9014 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.7633 | 95.583 | poecilia_latipinna | ENSPLAP00000011782 | 98.7633 | 95.583 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.6749 | 95.7597 | anabas_testudineus | ENSATEP00000031542 | 98.6749 | 95.7597 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.8799 | 95.053 | scophthalmus_maximus | ENSSMAP00000010913 | 98.8403 | 95.9857 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4982 | 95.4064 | pundamilia_nyererei | ENSPNYP00000001864 | 98.4982 | 95.4064 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.5866 | 95.4947 | oreochromis_niloticus | ENSONIP00000061496 | 98.5866 | 95.4947 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4982 | 96.0247 | myripristis_murdjan | ENSMMDP00005030186 | 98.4982 | 96.0247 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.1449 | 95.7597 | paramormyrops_kingsleyae | ENSPKIP00000010851 | 98.1449 | 95.7597 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 23.2332 | 22.1731 | tetraodon_nigroviridis | ENSTNIP00000015087 | 98.1343 | 93.6567 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 96.0247 | 92.3145 | tetraodon_nigroviridis | ENSTNIP00000004053 | 94.2758 | 90.6331 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.7633 | 96.4664 | larimichthys_crocea | ENSLCRP00005052303 | 98.7633 | 96.4664 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4099 | 95.318 | nothobranchius_furzeri | ENSNFUP00015047978 | 98.4969 | 95.4023 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.7915 | 95.2297 | denticeps_clupeoides | ENSDCDP00000014025 | 97.9646 | 95.3982 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.6749 | 95.7597 | betta_splendens | ENSBSLP00000038472 | 98.6749 | 95.7597 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.7633 | 95.6714 | poecilia_reticulata | ENSPREP00000026062 | 98.7633 | 95.6714 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 95.9364 | 95.053 | oncorhynchus_tshawytscha | ENSOTSP00005084802 | 97.5741 | 96.6757 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 63.6926 | 62.6325 | hucho_hucho | ENSHHUP00000055141 | 93.1525 | 91.6021 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.7633 | 95.4064 | xiphophorus_maculatus | ENSXMAP00000039728 | 96.4625 | 93.1838 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 96.7314 | 94.1696 | labrus_bergylta | ENSLBEP00000034329 | 98.1183 | 95.5197 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 84.0989 | 80.477 | sinocyclocheilus_grahami | ENSSGRP00000082795 | 90.8397 | 86.9275 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 92.8445 | 89.6643 | sinocyclocheilus_grahami | ENSSGRP00000064381 | 95.1131 | 91.8552 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 32.9505 | 31.0071 | stegastes_partitus | ENSSPAP00000011783 | 92.5558 | 87.0968 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4982 | 95.2297 | takifugu_rubripes | ENSTRUP00000021789 | 98.4982 | 95.2297 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 95.053 | 91.8728 | maylandia_zebra | ENSMZEP00005025463 | 97.2875 | 94.0325 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 97.4382 | 94.6996 | scleropages_formosus | ENSSFOP00015011617 | 97.4382 | 94.6996 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.6749 | 96.1131 | sparus_aurata | ENSSAUP00010052917 | 98.6749 | 96.1131 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4099 | 95.9364 | sander_lucioperca | ENSSLUP00000060129 | 98.4099 | 95.9364 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.5866 | 95.8481 | dicentrarchus_labrax | ENSDLAP00005070783 | 98.5866 | 95.8481 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 30.1237 | 29.0636 | oryzias_melastigma | ENSOMEP00000009414 | 99.4169 | 95.9184 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.4099 | 96.2014 | cyprinus_carpio_carpio | ENSCCRP00000007250 | 97.8051 | 95.6102 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 83.4806 | 71.5548 | ciona_savignyi | ENSCSAVP00000013611 | 82.6049 | 70.8042 |
| ENSOKIG00005006322 | oncorhynchus_kisutch | ENSOKIP00005014699 | 98.6749 | 96.3781 | seriola_lalandi_dorsalis | ENSSLDP00000029674 | 98.6749 | 96.3781 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
