RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSOJAG00000005932	Gene ID		Accession	-
Symbol	rnaset2l	Alias	-	Full Name	ribonuclease T2, like
Status	Confidence	Length	3298 bases	Strand	Plus strand
Position	13 : 36787174 - 36790471	RNA binding domain	Ribonuclease_T2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSOJAP00000011088	Ribonuclease_T2	PF00445	8e-42	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
rnaset2l-201	ENSOJAT00000011872	932	268aa	ENSOJAP00000011088

Gene Model

Click here to download ENSOJAG00000005932's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSOJAG00000005932's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000035822	45.4545	30.5785	oryzias_javanicus	ENSOJAP00000011088	41.0448	27.6119

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	75.7463	60.4478	poecilia_reticulata	ENSPREP00000009821	75.4647	60.223
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	73.1343	62.3134	fundulus_heteroclitus	ENSFHEP00000011041	67.1233	57.1918
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	77.2388	62.3134	xiphophorus_maculatus	ENSXMAP00000033977	60	48.4058
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	88.0597	79.1045	oryzias_latipes	ENSORLP00000030607	88.0597	79.1045
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	61.9403	52.6119	oreochromis_niloticus	ENSONIP00000001389	51.2346	43.5185
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	72.0149	59.7015	astatotilapia_calliptera	ENSACLP00000016251	71.4815	59.2593
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	73.5075	59.7015	cyclopterus_lumpus	ENSCLMP00005009064	73.2342	59.4796
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	70.5224	59.7015	sparus_aurata	ENSSAUP00010000252	70.7865	59.9251
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	73.8806	62.6866	dicentrarchus_labrax	ENSDLAP00005028561	71.4801	60.6498
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	75.3731	61.5672	cyprinodon_variegatus	ENSCVAP00000023834	71.3781	58.3039
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	56.7164	47.7612	takifugu_rubripes	ENSTRUP00000056156	71.028	59.8131
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	91.0448	87.3134	oryzias_melastigma	ENSOMEP00000018050	85.9155	82.3944
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	75.3731	60.0746	poecilia_formosa	ENSPFOP00000000627	74.5387	59.4096
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	55.9701	46.6418	seriola_dumerili	ENSSDUP00000019915	70.7547	58.9623
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	73.8806	60.0746	cottoperca_gobio	ENSCGOP00000032239	74.717	60.7547
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	73.1343	61.5672	scophthalmus_maximus	ENSSMAP00000007625	66.6667	56.1224
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	58.5821	48.5075	labrus_bergylta	ENSLBEP00000021073	69.7778	57.7778
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	72.3881	58.9552	anabas_testudineus	ENSATEP00000003894	73.2076	59.6226
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	51.1194	44.7761	acanthochromis_polyacanthus	ENSAPOP00000010540	77.8409	68.1818
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	63.806	52.9851	pundamilia_nyererei	ENSPNYP00000012241	69.7959	57.9592
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	57.4627	47.3881	seriola_lalandi_dorsalis	ENSSLDP00000010388	70.9677	58.5253
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	75.7463	65.6716	amphiprion_percula	ENSAPEP00000029783	74.6324	64.7059
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	47.7612	38.806	tetraodon_nigroviridis	ENSTNIP00000003987	66.3212	53.886
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	63.806	52.9851	hippocampus_comes	ENSHCOP00000019535	45.3581	37.6658
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	76.4925	66.791	stegastes_partitus	ENSSPAP00000013739	75.0916	65.5678
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	74.2537	60.4478	larimichthys_crocea	ENSLCRP00005020015	63.7821	51.9231
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	72.0149	60.8209	mastacembelus_armatus	ENSMAMP00000029409	73.384	61.9772
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	72.0149	59.7015	maylandia_zebra	ENSMZEP00005000039	71.4815	59.2593
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	66.791	55.2239	neolamprologus_brichardi	ENSNBRP00000006359	70.1961	58.0392
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	56.3433	47.7612	amphiprion_ocellaris	ENSAOCP00000027366	74.0196	62.7451
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	39.1791	22.3881	caenorhabditis_elegans	K10C9.3.1	37.6344	21.5054
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	63.4328	47.7612	cynoglossus_semilaevis	ENSCSEP00000024634	66.9291	50.3937
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	75	59.3284	poecilia_latipinna	ENSPLAP00000025800	74.1697	58.6716
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	41.4179	26.4925	drosophila_melanogaster	FBpp0076469	34.1538	21.8462
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	40.2985	25	ciona_intestinalis	ENSCINP00000030837	43.7247	27.1255
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	36.194	20.5224	callorhinchus_milii	ENSCMIP00000009331	62.1795	35.2564
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	40.2985	31.7164	lepisosteus_oculatus	ENSLOCP00000018088	63.1579	49.7076
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	54.8507	40.2985	danio_rerio	ENSDARP00000075733	64.1921	47.1616
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	57.4627	41.4179	carassius_auratus	ENSCARP00000048400	59.0038	42.5287
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	60.8209	43.6567	astyanax_mexicanus	ENSAMXP00000037728	61.7424	44.3182
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	60.0746	45.1493	ictalurus_punctatus	ENSIPUP00000010988	61.9231	46.5385
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	61.194	45.1493	electrophorus_electricus	ENSEEEP00000052412	62.3574	46.0076
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	63.806	50	esox_lucius	ENSELUP00000033276	64.7727	50.7576
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	62.6866	49.6269	oncorhynchus_kisutch	ENSOKIP00005074274	65.8824	52.1569
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	64.1791	51.8657	oncorhynchus_kisutch	ENSOKIP00005087760	65.9004	53.2567
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	63.4328	50	oncorhynchus_mykiss	ENSOMYP00000097403	65.8915	51.938
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	64.1791	51.8657	oncorhynchus_mykiss	ENSOMYP00000056155	63.0037	50.9158
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	63.806	51.4925	salmo_salar	ENSSSAP00000047267	65.5172	52.8736
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	64.5522	51.8657	salmo_trutta	ENSSTUP00000010337	66.2835	53.2567
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	64.5522	48.5075	gadus_morhua	ENSGMOP00000057549	64.5522	48.5075
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	51.4925	36.9403	chrysemys_picta_bellii	ENSCPBP00000008880	56.5574	40.5738
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	51.4925	35.4478	sphenodon_punctatus	ENSSPUP00000015219	57.0248	39.2562
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	56.7164	44.7761	erpetoichthys_calabaricus	ENSECRP00000026586	60.3175	47.619
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	42.1642	28.3582	anolis_carolinensis	ENSACAP00000037043	38.3051	25.7627
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	50.3731	35.4478	naja_naja	ENSNNAP00000026144	53.5714	37.6984
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	57.0896	41.4179	pygocentrus_nattereri	ENSPNAP00000004506	68.6099	49.7758
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	42.1642	25.7463	ciona_savignyi	ENSCSAVP00000011340	42.803	26.1364
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	51.8657	35.8209	podarcis_muralis	ENSPMRP00000021684	54.5098	37.6471
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	56.3433	41.4179	sinocyclocheilus_grahami	ENSSGRP00000021030	59.2157	43.5294
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	64.1791	52.2388	oncorhynchus_tshawytscha	ENSOTSP00005039545	65.9004	53.6398
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	62.6866	49.6269	oncorhynchus_tshawytscha	ENSOTSP00005034531	65.8824	52.1569
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	57.4627	45.8955	hucho_hucho	ENSHHUP00000084491	56.8266	45.3875
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	54.4776	38.4328	salvator_merianae	ENSSMRP00000019713	58.4	41.2
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	59.7015	47.3881	paramormyrops_kingsleyae	ENSPKIP00000022051	62.7451	49.8039
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	53.3582	36.9403	gopherus_evgoodei	ENSGEVP00005008151	58.6066	40.5738
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	38.0597	23.1343	saccharomyces_cerevisiae	YPL123C	23.5023	14.2857
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	59.3284	43.6567	cyprinus_carpio_carpio	ENSCCRP00000119027	60.9195	44.8276
ENSOJAG00000005932	oryzias_javanicus	ENSOJAP00000011088	48.8806	36.5672	denticeps_clupeoides	ENSDCDP00000012775	50	37.4046

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression