| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSOJAG00000005474 | Gene ID |
|
Accession |
- |
| Symbol |
tars3 |
Alias |
- |
Full Name |
threonyl-tRNA synthetase 3 |
| Status |
Confidence |
Length |
15908 bases |
Strand |
Minus strand |
| Position |
3 : 32210818 - 32226725 |
RNA binding domain |
HGTP_anticodon , tRNA_SAD , tRNA-synt_2b |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSOJAP00000010863 |
HGTP_anticodon |
PF03129 |
1.3e-18 |
1 |
| ENSOJAP00000010863 |
tRNA_SAD |
PF07973 |
1.1e-11 |
2 |
| ENSOJAP00000010863 |
tRNA-synt_2b |
PF00587 |
2.4e-34 |
3 |
| ENSOJAP00000010930 |
HGTP_anticodon |
PF03129 |
1.5e-18 |
1 |
| ENSOJAP00000010930 |
tRNA_SAD |
PF07973 |
1.1e-11 |
2 |
| ENSOJAP00000010930 |
tRNA-synt_2b |
PF00587 |
2.5e-34 |
3 |
| ENSOJAP00000011405 |
HGTP_anticodon |
PF03129 |
2.3e-18 |
1 |
| ENSOJAP00000011405 |
tRNA_SAD |
PF07973 |
9.6e-12 |
2 |
| ENSOJAP00000011405 |
tRNA-synt_2b |
PF00587 |
2.1e-34 |
3 |
| ENSOJAP00000011376 |
HGTP_anticodon |
PF03129 |
2.1e-12 |
1 |
| ENSOJAP00000011376 |
tRNA_SAD |
PF07973 |
8.8e-12 |
2 |
| ENSOJAP00000011376 |
tRNA-synt_2b |
PF00587 |
1.1e-32 |
3 |
| ENSOJAP00000011365 |
HGTP_anticodon |
PF03129 |
2.3e-12 |
1 |
| ENSOJAP00000011365 |
tRNA_SAD |
PF07973 |
9.3e-12 |
2 |
| ENSOJAP00000011365 |
tRNA-synt_2b |
PF00587 |
2e-34 |
3 |
| ENSOJAP00000011754 |
HGTP_anticodon |
PF03129 |
3.1e-07 |
1 |
| ENSOJAP00000011754 |
tRNA_SAD |
PF07973 |
1.1e-11 |
2 |
| ENSOJAP00000011754 |
tRNA-synt_2b |
PF00587 |
1e-32 |
3 |
| ENSOJAP00000011733 |
tRNA_SAD |
PF07973 |
9.8e-12 |
1 |
| ENSOJAP00000011733 |
tRNA-synt_2b |
PF00587 |
9.6e-33 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSOJAT00000011629 |
2682 |
790aa |
ENSOJAP00000010863 |
| - |
ENSOJAT00000011697 |
2745 |
811aa |
ENSOJAP00000010930 |
| - |
ENSOJAT00000012159 |
2481 |
723aa |
ENSOJAP00000011365 |
| - |
ENSOJAT00000012171 |
2403 |
697aa |
ENSOJAP00000011376 |
| - |
ENSOJAT00000012200 |
2496 |
728aa |
ENSOJAP00000011405 |
| - |
ENSOJAT00000012536 |
2256 |
751aa |
ENSOJAP00000011733 |
| - |
ENSOJAT00000012559 |
2361 |
786aa |
ENSOJAP00000011754 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000003541 | 38.4134 | 20.2505 | oryzias_javanicus | ENSOJAP00000010930 | 22.688 | 11.9605 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000040256 | 69.8182 | 54.3636 | oryzias_javanicus | ENSOJAP00000010930 | 47.349 | 36.8681 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000015789 | 41.994 | 23.565 | oryzias_javanicus | ENSOJAP00000010930 | 17.1393 | 9.61776 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000034278 | 84.7458 | 74.1525 | oryzias_javanicus | ENSOJAP00000010930 | 73.9827 | 64.7349 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 88.7793 | 83.8471 | poecilia_reticulata | ENSPREP00000011963 | 92.4262 | 87.2914 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.1356 | 84.4636 | fundulus_heteroclitus | ENSFHEP00000009164 | 70.8333 | 66.376 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.0949 | 88.2861 | xiphophorus_maculatus | ENSXMAP00000016731 | 92.7518 | 87.9607 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 97.5339 | 94.9445 | oryzias_latipes | ENSORLP00000017952 | 97.4138 | 94.8276 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.3551 | 87.053 | oreochromis_niloticus | ENSONIP00000077600 | 90.241 | 85.0602 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.5882 | 88.2861 | haplochromis_burtoni | ENSHBUP00000018833 | 93.2432 | 87.9607 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.7115 | 88.2861 | astatotilapia_calliptera | ENSACLP00000027394 | 93.3661 | 87.9607 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 65.1048 | 61.8989 | cyclopterus_lumpus | ENSCLMP00005001344 | 95.3069 | 90.6137 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 94.4513 | 89.5191 | lates_calcarifer | ENSLCAP00010059044 | 94.2189 | 89.2989 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.9581 | 88.9026 | sparus_aurata | ENSSAUP00010056034 | 93.7269 | 88.6839 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 94.328 | 88.656 | dicentrarchus_labrax | ENSDLAP00005057382 | 89.2649 | 83.8973 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.2318 | 87.4229 | cyprinodon_variegatus | ENSCVAP00000025076 | 93.1507 | 88.2939 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.2725 | 79.5314 | takifugu_rubripes | ENSTRUP00000007981 | 89.9379 | 80.1242 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.9716 | 87.5462 | kryptolebias_marmoratus | ENSKMAP00000002310 | 92.402 | 87.0098 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 99.7534 | 98.767 | oryzias_melastigma | ENSOMEP00000015536 | 99.7534 | 98.767 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.9716 | 88.0395 | poecilia_formosa | ENSPFOP00000014158 | 92.5153 | 87.6074 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.9581 | 88.7793 | seriola_dumerili | ENSSDUP00000010245 | 93.7269 | 88.5609 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 13.1936 | 11.4673 | cottoperca_gobio | ENSCGOP00000032885 | 78.6765 | 68.3824 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.3958 | 84.217 | scophthalmus_maximus | ENSSMAP00000047848 | 92.0051 | 86.6751 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 75.9556 | 72.5031 | labrus_bergylta | ENSLBEP00000023801 | 97.0079 | 92.5984 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.1085 | 86.8064 | labrus_bergylta | ENSLBEP00000024260 | 91.4321 | 86.1689 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 83.2306 | 80.148 | amphilophus_citrinellus | ENSACIP00000006646 | 96.291 | 92.7247 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 82.3674 | 77.8052 | gasterosteus_aculeatus | ENSGACP00000019326 | 92.011 | 86.9146 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.9716 | 87.2996 | anabas_testudineus | ENSATEP00000005783 | 92.9716 | 87.2996 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 68.434 | 66.5845 | acanthochromis_polyacanthus | ENSAPOP00000018376 | 98.4043 | 95.7447 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 94.0814 | 90.6289 | oryzias_sinensis | ENSOSIP00000049074 | 92.0386 | 88.661 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 77.8052 | 74.8459 | pundamilia_nyererei | ENSPNYP00000012924 | 96.6309 | 92.9556 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.9581 | 88.9026 | seriola_lalandi_dorsalis | ENSSLDP00000021232 | 93.7269 | 88.6839 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 94.2047 | 89.1492 | amphiprion_percula | ENSAPEP00000011213 | 93.9729 | 88.9299 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 20.9618 | 17.2626 | tetraodon_nigroviridis | ENSTNIP00000004523 | 88.0829 | 72.5389 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 86.5598 | 76.6954 | tetraodon_nigroviridis | ENSTNIP00000014887 | 87.75 | 77.75 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 82.2441 | 77.312 | hippocampus_comes | ENSHCOP00000017521 | 92.7677 | 87.2045 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.8348 | 88.9026 | stegastes_partitus | ENSSPAP00000027138 | 93.8348 | 88.9026 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.8348 | 89.0259 | larimichthys_crocea | ENSLCRP00005026868 | 93.2598 | 88.4804 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.4784 | 86.9297 | mastacembelus_armatus | ENSMAMP00000007787 | 91.352 | 85.8709 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 93.7115 | 88.4094 | maylandia_zebra | ENSMZEP00005007500 | 93.3661 | 88.0835 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.4784 | 86.0666 | nothobranchius_furzeri | ENSNFUP00015049182 | 92.2509 | 85.8549 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 54.254 | 50.0617 | neolamprologus_brichardi | ENSNBRP00000010352 | 91.6667 | 84.5833 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.9988 | 86.8064 | sander_lucioperca | ENSSLUP00000033593 | 92.7136 | 88.4422 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 91.6153 | 84.8335 | betta_splendens | ENSBSLP00000032264 | 91.8418 | 85.0433 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 94.5746 | 89.5191 | amphiprion_ocellaris | ENSAOCP00000023269 | 94.3419 | 89.2989 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.8483 | 86.8064 | cynoglossus_semilaevis | ENSCSEP00000017371 | 92.6199 | 86.5929 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 92.9716 | 88.0395 | poecilia_latipinna | ENSPLAP00000008551 | 92.629 | 87.715 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 64.2417 | 55.2404 | ciona_intestinalis | ENSCINP00000008908 | 82.8299 | 71.2242 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 81.9975 | 70.4069 | petromyzon_marinus | ENSPMAP00000005505 | 81.4951 | 69.9755 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 78.2984 | 68.5573 | eptatretus_burgeri | ENSEBUP00000017573 | 82.0413 | 71.8346 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 81.8742 | 72.9963 | latimeria_chalumnae | ENSLACP00000021270 | 84.6939 | 75.5102 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 68.0641 | 59.0629 | lepisosteus_oculatus | ENSLOCP00000017977 | 70.8601 | 61.4891 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.6424 | 83.1073 | clupea_harengus | ENSCHAP00000016446 | 88.9841 | 82.4969 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 51.0481 | 47.9655 | danio_rerio | ENSDARP00000138354 | 95.612 | 89.8383 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 80.148 | 72.3798 | carassius_auratus | ENSCARP00000057394 | 84.1969 | 76.0363 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.5191 | 82.7374 | astyanax_mexicanus | ENSAMXP00000021476 | 84.8131 | 78.3878 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.0123 | 82.2441 | ictalurus_punctatus | ENSIPUP00000015009 | 88.8078 | 81.1436 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.0259 | 80.5179 | electrophorus_electricus | ENSEEEP00000006889 | 87.0929 | 78.7696 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.889 | 83.1073 | esox_lucius | ENSELUP00000030269 | 89.3382 | 82.598 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.0123 | 83.6005 | oncorhynchus_kisutch | ENSOKIP00005035456 | 88.3777 | 82.0823 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.5191 | 83.4772 | oncorhynchus_kisutch | ENSOKIP00005054611 | 87.7872 | 81.8622 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.5191 | 83.2306 | oncorhynchus_mykiss | ENSOMYP00000069416 | 87.7872 | 81.6203 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.3822 | 83.3539 | oncorhynchus_mykiss | ENSOMYP00000098148 | 88.3133 | 81.4458 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 86.6831 | 80.148 | salmo_salar | ENSSSAP00000093598 | 88.8748 | 82.1745 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.2589 | 83.6005 | salmo_salar | ENSSSAP00000099040 | 88.0866 | 81.5884 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.3822 | 83.7238 | salmo_trutta | ENSSTUP00000032626 | 82.3596 | 76.2921 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 85.6967 | 79.2848 | salmo_trutta | ENSSTUP00000062044 | 89.6774 | 82.9677 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.3958 | 81.381 | gadus_morhua | ENSGMOP00000060370 | 88.848 | 80.8824 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 82.6141 | 71.5166 | xenopus_tropicalis | ENSXETP00000043847 | 82.3096 | 71.2531 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 67.5709 | 55.1171 | chrysemys_picta_bellii | ENSCPBP00000010762 | 76.9663 | 62.7809 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 29.2232 | 23.1813 | sphenodon_punctatus | ENSSPUP00000001945 | 71.8182 | 56.9697 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 79.9014 | 67.9408 | notechis_scutatus | ENSNSUP00000026521 | 81.203 | 69.0476 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 65.8446 | 53.5142 | pelodiscus_sinensis | ENSPSIP00000017599 | 81.5267 | 66.2595 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 41.6769 | 35.635 | erpetoichthys_calabaricus | ENSECRP00000033134 | 86.0051 | 73.5369 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 80.148 | 68.5573 | naja_naja | ENSNNAP00000007895 | 83.4403 | 71.3736 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.2589 | 83.2306 | pygocentrus_nattereri | ENSPNAP00000009846 | 88.6199 | 81.7191 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 84.8335 | 76.942 | sinocyclocheilus_grahami | ENSSGRP00000045222 | 88.2051 | 80 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 89.3958 | 83.2306 | oncorhynchus_tshawytscha | ENSOTSP00005029322 | 87.6663 | 81.6203 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.2589 | 83.3539 | oncorhynchus_tshawytscha | ENSOTSP00005027687 | 88.5127 | 81.7412 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.1356 | 83.3539 | hucho_hucho | ENSHHUP00000047205 | 87.6499 | 81.0552 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.0123 | 83.2306 | hucho_hucho | ENSHHUP00000011192 | 87.1122 | 80.5489 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 67.0777 | 54.254 | chelonoidis_abingdonii | ENSCABP00000014521 | 71.2042 | 57.5916 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 88.656 | 79.7781 | scleropages_formosus | ENSSFOP00015026586 | 82.8341 | 74.5392 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 90.9988 | 85.3268 | myripristis_murdjan | ENSMMDP00005043456 | 90.7749 | 85.1169 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 70.2836 | 56.3502 | terrapene_carolina_triunguis | ENSTMTP00000008708 | 70.4574 | 56.4895 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 88.656 | 79.9014 | paramormyrops_kingsleyae | ENSPKIP00000001925 | 89.0954 | 80.2974 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 67.0777 | 54.3773 | gopherus_evgoodei | ENSGEVP00005020659 | 77.6034 | 62.9101 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 87.5462 | 79.6547 | cyprinus_carpio_carpio | ENSCCRP00000116822 | 88.8611 | 80.8511 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 88.5327 | 80.3946 | cyprinus_carpio_carpio | ENSCCRP00000085847 | 87.8825 | 79.8042 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 81.9975 | 70.9001 | leptobrachium_leishanense | ENSLLEP00000007829 | 81.9975 | 70.9001 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 82.3674 | 75.2158 | denticeps_clupeoides | ENSDCDP00000055418 | 92.3928 | 84.3707 |
| ENSOJAG00000005474 | oryzias_javanicus | ENSOJAP00000010930 | 88.5327 | 80.6412 | denticeps_clupeoides | ENSDCDP00000057454 | 89.638 | 81.6479 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
