| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSOGAG00000012798 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
119228 bases |
Strand |
Minus strand |
| Position |
GL873543.1 : 2303759 - 2422986 |
RNA binding domain |
PPR_3 , PPR_long , PPR |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSOGAP00000011476 |
PPR_3 |
PF13812 |
3.2e-26 |
1 |
| ENSOGAP00000011476 |
PPR_3 |
PF13812 |
3.2e-26 |
2 |
| ENSOGAP00000011476 |
PPR_3 |
PF13812 |
3.2e-26 |
3 |
| ENSOGAP00000011476 |
PPR_long |
PF17177 |
3e-27 |
4 |
| ENSOGAP00000011476 |
PPR |
PF01535 |
1.5e-33 |
5 |
| ENSOGAP00000011476 |
PPR |
PF01535 |
1.5e-33 |
6 |
| ENSOGAP00000011476 |
PPR |
PF01535 |
1.5e-33 |
7 |
| ENSOGAP00000011476 |
PPR |
PF01535 |
1.5e-33 |
8 |
| ENSOGAP00000011476 |
PPR |
PF01535 |
1.5e-33 |
9 |
| ENSOGAP00000011476 |
PPR |
PF01535 |
1.5e-33 |
10 |
| ENSOGAP00000011476 |
PPR |
PF01535 |
1.5e-33 |
11 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSOGAT00000012807 |
4182 |
1393aa |
ENSOGAP00000011476 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOGAG00000012798 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 71.7875 | 64.3216 | choloepus_hoffmanni | ENSCHOP00000003231 | 72.0981 | 64.5999 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 87.0065 | 77.8177 | dasypus_novemcinctus | ENSDNOP00000009798 | 87.1316 | 77.9296 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 58.0761 | 48.3848 | dasypus_novemcinctus | ENSDNOP00000020662 | 75.9624 | 63.2864 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 61.3783 | 52.5485 | erinaceus_europaeus | ENSEEUP00000011323 | 66.4852 | 56.9207 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 87.509 | 76.8126 | echinops_telfairi | ENSETEP00000005410 | 87.509 | 76.8126 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 88.3704 | 79.7559 | cercocebus_atys | ENSCATP00000003773 | 84.2574 | 76.0438 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 88.3704 | 80.1866 | macaca_nemestrina | ENSMNEP00000015080 | 88.1174 | 79.9571 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 87.7961 | 79.1098 | mustela_putorius_furo | ENSMPUP00000011706 | 87.5447 | 78.8833 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 86.0014 | 79.6124 | tursiops_truncatus | ENSTTRP00000006060 | 86.0014 | 79.6124 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 84.6375 | 74.0847 | loxodonta_africana | ENSLAFP00000019681 | 84.1542 | 73.6617 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 62.6705 | 56.066 | procavia_capensis | ENSPCAP00000001447 | 63.5371 | 56.8413 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 89.2319 | 81.4788 | capra_hircus | ENSCHIP00000022836 | 89.3602 | 81.596 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 74.9462 | 66.8342 | ochotona_princeps | ENSOPRP00000015336 | 75.4335 | 67.2688 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 86.7911 | 75.3051 | cricetulus_griseus_chok1gshd | ENSCGRP00001015743 | 86.8534 | 75.3592 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 76.6691 | 67.6238 | cavia_porcellus | ENSCPOP00000000178 | 88.7781 | 78.3042 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 80.4738 | 72.8643 | vicugna_pacos | ENSVPAP00000008367 | 83.5943 | 75.6898 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 89.0165 | 81.5506 | ictidomys_tridecemlineatus | ENSSTOP00000029316 | 86.5318 | 79.2742 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 88.0115 | 80.3302 | chlorocebus_sabaeus | ENSCSAP00000009186 | 87.6967 | 80.0429 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 86.145 | 78.8227 | pteropus_vampyrus | ENSPVAP00000001898 | 86.0832 | 78.7661 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 87.6525 | 77.8177 | microtus_ochrogaster | ENSMOCP00000006424 | 87.7155 | 77.8736 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 87.0065 | 77.3869 | chinchilla_lanigera | ENSCLAP00000007399 | 86.8195 | 77.2206 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 70.4953 | 59.799 | sorex_araneus | ENSSARP00000000394 | 83.5745 | 70.8936 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 87.2936 | 79.1816 | nomascus_leucogenys | ENSNLEP00000020435 | 88.1798 | 79.9855 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 87.2218 | 79.3252 | panthera_tigris_altaica | ENSPTIP00000000544 | 87.1593 | 79.2683 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 89.5908 | 81.4788 | myotis_lucifugus | ENSMLUP00000009670 | 89.4624 | 81.362 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 62.0244 | 42.8571 | petromyzon_marinus | ENSPMAP00000002368 | 65.7534 | 45.4338 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 16.6547 | 12.1321 | eptatretus_burgeri | ENSEBUP00000025786 | 59.9483 | 43.6693 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 75.8076 | 59.7272 | latimeria_chalumnae | ENSLACP00000015933 | 73.7945 | 58.1412 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 74.5872 | 56.7121 | lepisosteus_oculatus | ENSLOCP00000020256 | 70.5363 | 53.632 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 68.2699 | 49.3898 | danio_rerio | ENSDARP00000111776 | 65.0924 | 47.091 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 68.0546 | 49.8205 | fundulus_heteroclitus | ENSFHEP00000017838 | 66.7136 | 48.8388 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 69.0596 | 50.6102 | xiphophorus_maculatus | ENSXMAP00000018156 | 67.9859 | 49.8233 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 67.4085 | 49.2462 | oryzias_latipes | ENSORLP00000005797 | 65.299 | 47.7051 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 65.9009 | 48.6719 | astatotilapia_calliptera | ENSACLP00000035182 | 70.1835 | 51.8349 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 49.2462 | 39.2678 | pelodiscus_sinensis | ENSPSIP00000007632 | 79.0323 | 63.0184 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 11.7014 | 10.0503 | pelodiscus_sinensis | ENSPSIP00000017651 | 69.6581 | 59.8291 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 70.28 | 51.1127 | cyprinodon_variegatus | ENSCVAP00000026988 | 68.8951 | 50.1056 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 63.3884 | 47.0926 | neolamprologus_brichardi | ENSNBRP00000017258 | 73.278 | 54.4398 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 67.2649 | 48.9591 | amphilophus_citrinellus | ENSACIP00000012395 | 69.8212 | 50.8197 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 68.8442 | 49.3898 | gasterosteus_aculeatus | ENSGACP00000014169 | 68.8442 | 49.3898 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 24.5513 | 11.1271 | saccharomyces_cerevisiae | YLR067C | 35.4404 | 16.0622 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 70.9261 | 50.8973 | amphiprion_ocellaris | ENSAOCP00000002732 | 69.1393 | 49.6151 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 68.7006 | 50.1795 | poecilia_formosa | ENSPFOP00000011667 | 67.7762 | 49.5042 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 66.1163 | 48.3848 | pundamilia_nyererei | ENSPNYP00000001107 | 68.6289 | 50.2235 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 70.8543 | 52.0459 | maylandia_zebra | ENSMZEP00005036721 | 68.9727 | 50.6639 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 24.336 | 17.9469 | oryzias_melastigma | ENSOMEP00000028638 | 65.9533 | 48.6381 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 67.6956 | 50.1077 | tetraodon_nigroviridis | ENSTNIP00000010279 | 68.3829 | 50.6164 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 67.552 | 48.313 | amphiprion_percula | ENSAPEP00000004420 | 68.2874 | 48.8389 |
| ENSOGAG00000012798 | otolemur_garnettii | ENSOGAP00000011476 | 67.8392 | 48.1694 | stegastes_partitus | ENSSPAP00000000169 | 65.534 | 46.5326 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
